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Imputing single-cell RNA-seq data by considering cell heterogeneity and prior expression of dropouts 期刊论文
JOURNAL OF MOLECULAR CELL BIOLOGY, 2021, 卷号: 13, 期号: 1, 页码: 29-40
作者:  Zhang, Lihua;  Zhang, Shihua
收藏  |  浏览/下载：131/0  |  提交时间：2021/10/26
single-cell RNA-seq  dropout  imputation  low-rank  systems biology  
DC3 is a method for deconvolution and coupled clustering from bulk and single-cell genomics data 期刊论文
NATURE COMMUNICATIONS, 2019, 卷号: 10, 页码: 11
作者:  Zeng, Wanwen;  Chen, Xi;  Duren, Zhana;  Wang, Yong;  Jiang, Rui;  Wong, Wing Hung
收藏  |  浏览/下载：183/0  |  提交时间：2020/01/10
Genetic Load and Potential Mutational Meltdown in Cancer Cell Populations 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2019, 卷号: 36, 期号: 3, 页码: 541-552
作者:  Zhang, Yuezheng;  Li, Yawei;  Li, Tao;  Shen, Xu;  Zhu, Tianqi;  Tao, Yong;  Li, Xueying;  Wang, Di;  Ma, Qin;  Hu, Zheng;  Liu, Jialin;  Ruan, Jue;  Cai, Jun;  Wang, Hurng-Yi;  Lu, Xuemei
收藏  |  浏览/下载：256/0  |  提交时间：2020/01/10
genetic load  Muller's ratchet  HeLa cell line  copy number variation  
Integrative analysis of single-cell genomics data by coupled nonnegative matrix factorizations 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2018, 卷号: 115, 期号: 30, 页码: 7723-7728
作者:  Duren, Zhana;  Chen, Xi;  Zamanighomi, Mahdi;  Zeng, Wanwen;  Satpathy, Ansuman T.;  Chang, Howard Y.;  Wang, Yong;  Wong, Wing Hung
收藏  |  浏览/下载：178/0  |  提交时间：2019/12/13
coupled clustering  NMF  single-cell genomic data  
multiobjectiveoptimizationofthedistributedpermutationflowshopschedulingproblemwithtransportationandeligibilityconstraints 期刊论文
journaloftheoperationsresearchsocietyofchina, 2018, 卷号: 6, 期号: 3, 页码: 391
作者:  Cai Shuang;  Yang Ke;  Liu Ke
收藏  |  浏览/下载：222/0  |  提交时间：2020/01/10
Multi-objective Optimization of the Distributed Permutation Flow Shop Scheduling Problem with Transportation and Eligibility Constraints 期刊论文
Journal of the Operations Research Society of China,, 2018, 卷号: 6, 期号: 3, 页码: 391
作者:  Cai Shuang;  Yang Ke;  Liu Ke
收藏  |  浏览/下载：167/0  |  提交时间：2021/01/14
Models and algorithms for haplotyping problem 期刊论文
CURRENT BIOINFORMATICS, 2006, 卷号: 1, 期号: 1, 页码: 105-114
作者:  Zhang, Xiang-Sun;  Wang, Rui-Sheng;  Wu, Ling-Yun;  Chen, Luonan
收藏  |  浏览/下载：85/0  |  提交时间：2018/07/30