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A simulation study to examine the impact of recombination on phylogenomic inferences under the multispecies coalescent model 期刊论文
MOLECULAR ECOLOGY, 2022, 页码: 16
Authors:  Zhu, Tianqi;  Flouri, Tomas;  Yang, Ziheng
Favorite  |  View/Download:10/0  |  Submit date:2022/04/29
BPP  introgression  MSci  multispecies coalescent  recombination  species delimitation  species tree  
Complexity of the simplest species tree problem 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2021, 卷号: 38, 期号: 9, 页码: 3993-4009
Authors:  Zhu, Tianqi;  Yang, Ziheng
Favorite  |  View/Download:13/0  |  Submit date:2022/04/02
concatenation  efficiency  molecular clock  MSC  multispecies coalescent  species tree  
The Asymptotic Behavior of Bootstrap Support Values in Molecular Phylogenetics 期刊论文
SYSTEMATIC BIOLOGY, 2021, 卷号: 70, 期号: 4, 页码: 774-785
Authors:  Huang, Jun;  Liu, Yuting;  Zhu, Tianqi;  Yang, Ziheng
Favorite  |  View/Download:34/0  |  Submit date:2021/10/26
Bootstrap  model selection  star-tree paradox  support value  
Genetic Load and Potential Mutational Meltdown in Cancer Cell Populations 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2019, 卷号: 36, 期号: 3, 页码: 541-552
Authors:  Zhang, Yuezheng;  Li, Yawei;  Li, Tao;  Shen, Xu;  Zhu, Tianqi;  Tao, Yong;  Li, Xueying;  Wang, Di;  Ma, Qin;  Hu, Zheng;  Liu, Jialin;  Ruan, Jue;  Cai, Jun;  Wang, Hurng-Yi;  Lu, Xuemei
Favorite  |  View/Download:89/0  |  Submit date:2020/01/10
genetic load  Muller's ratchet  HeLa cell line  copy number variation  
The Spectre of Too Many Species 期刊论文
SYSTEMATIC BIOLOGY, 2019, 卷号: 68, 期号: 1, 页码: 168-181
Authors:  Leache, Adam D.;  Zhu, Tianqi;  Rannala, Bruce;  Yang, Ziheng
Favorite  |  View/Download:81/0  |  Submit date:2020/01/10
bpp  multispecies coalescent  Species delimitation  taxonomy  
使用基因组数据进行贝叶斯物种分化时间估计 期刊论文
中国科学生命科学, 2019, 卷号: 000, 期号: 004, 页码: 472
Authors:  朱天琪
Favorite  |  View/Download:68/0  |  Submit date:2020/01/10
Prevalence of cryptic species in morphologically uniform taxa - Fast speciation and evolutionary radiation in Asian frogs 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2018, 卷号: 127, 页码: 723-731
Authors:  Liu, Zuyao;  Chen, Guoling;  Zhu, Tianqi;  Zeng, Zhaochi;  Lyu, Zhitong;  Wang, Jian;  Messenger, Kevin;  Greenberg, Anthony;  Guo, Zixiao;  Yang, Ziheng;  Shi, Suhua;  Wang, Yingyong
Favorite  |  View/Download:89/0  |  Submit date:2019/01/11
Cryptic species  Delimitation  Diversity  Megophrys  Phylogeography  
Ultrasensitive and high-efficiency screen of de novo low-frequency mutations by o2n-seq 期刊论文
NATURE COMMUNICATIONS, 2017, 卷号: 8, 页码: 11
Authors:  Wang, Kaile;  Lai, Shujuan;  Yang, Xiaoxu;  Zhu, Tianqi;  Lu, Xuemei;  Wu, Chung-I;  Ruan, Jue
Favorite  |  View/Download:63/0  |  Submit date:2018/07/30
Efficient simulation under a population genetics model of carcinogenesis 期刊论文
BIOINFORMATICS, 2011, 卷号: 27, 期号: 6, 页码: 837-843
Authors:  Zhu, Tianqi;  Hu, Yucheng;  Ma, Zhi-Ming;  Zhang, De-Xing;  Li, Tiejun;  Yang, Ziheng
Favorite  |  View/Download:117/0  |  Submit date:2018/07/30