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Integrative analysis of single-cell genomics data by coupled nonnegative matrix factorizations 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2018, 卷号: 115, 期号: 30, 页码: 7723-7728
作者:  Duren, Zhana;  Chen, Xi;  Zamanighomi, Mahdi;  Zeng, Wanwen;  Satpathy, Ansuman T.;  Chang, Howard Y.;  Wang, Yong;  Wong, Wing Hung
收藏  |  浏览/下载：178/0  |  提交时间：2019/12/13
coupled clustering  NMF  single-cell genomic data  
Predicting transcription factor binding motifs from DNA-binding domains, chromatin accessibility and gene expression data 期刊论文
NUCLEIC ACIDS RESEARCH, 2017, 卷号: 45, 期号: 10, 页码: 5666-5677
作者:  Zamanighomi, Mahdi;  Lin, Zhixiang;  Wang, Yong;  Jiang, Rui;  Wong, Wing Hung
收藏  |  浏览/下载：146/0  |  提交时间：2018/07/30
Simultaneous dimension reduction and adjustment for confounding variation 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2016, 卷号: 113, 期号: 51, 页码: 14662-14667
作者:  Lin, Zhixiang;  Yang, Can;  Zhu, Ying;  Duchi, John;  Fu, Yao;  Wang, Yong;  Jiang, Bai;  Zamanighomi, Mahdi;  Xu, Xuming;  Li, Mingfeng;  Sestan, Nenad;  Zhao, Hongyu;  Wong, Wing Hung
收藏  |  浏览/下载：131/0  |  提交时间：2018/07/30
dimension reduction  confounding variation  transcriptome