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Disease category-specific annotation of variants using an ensemble learning framework 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2022, 卷号: 23, 期号: 1, 页码: 15
作者:  Cao, Zhen;  Huang, Yanting;  Duan, Ran;  Jin, Peng;  Qin, Zhaohui S.;  Zhang, Shihua
收藏  |  浏览/下载：122/0  |  提交时间：2022/06/21
complex disease  disease category  functional annotation  non-coding variant  ensemble learning  
Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation 期刊论文
NATURE COMMUNICATIONS, 2020, 卷号: 11, 期号: 1, 页码: 20
作者:  Xin, Jingxue;  Zhang, Hui;  He, Yaoxi;  Duren, Zhana;  Bai, Caijuan;  Chen, Lang;  Luo, Xin;  Yan, Dong-Sheng;  Zhang, Chaoyu;  Zhu, Xiang;  Yuan, Qiuyue;  Feng, Zhanying;  Cui, Chaoying;  Qi, Xuebin;  Ouzhuluobu;  Wong, Wing Hung;  Wang, Yong;  Su, Bing
收藏  |  浏览/下载：177/0  |  提交时间：2021/01/14
IDLDA: An Improved Diffusion Model for Predicting LncRNA-Disease Associations (vol 10, 1259, 2019) 期刊论文
FRONTIERS IN GENETICS, 2020, 卷号: 11, 页码: 2
作者:  Wang, Qi;  Yan, Guiying
收藏  |  浏览/下载：172/0  |  提交时间：2020/05/24
long non-coding RNA  disease  association prediction  computational prediction model  diffusion model  
ZokorDB: tissue specific regulatory network annotation for non-coding elements of plateau zokor 期刊论文
定量生物学:英文版, 2020, 卷号: 8.0, 期号: 1.0, 页码: 43-50
作者:  Jingxue Xin;  Junjun Hao;  Lang Chen;  Tao Zhang;  Lei Li;  Luonan Chen;  Wenmin Zhao;  Xuemei Lu;  Peng Shi;  Yong Wang
收藏  |  浏览/下载：176/0  |  提交时间：2021/01/14
tissue  specific  regulatory  network  non-coding  element  plateau  zokor  non-model  species  
zokordbtissuespecificregulatorynetworkannotationfornoncodingelementsofplateauzokor 期刊论文
quantitativebiology, 2020, 卷号: 8, 期号: 1, 页码: 43-50
作者:  Xin Jingxue;  Hao Junjun;  Chen Lang;  Zhang Tao;  Li Lei;  Chen Luonan;  Zhao Wenmin;  Lu Xuemei;  Shi Peng;  Wang Yong
收藏  |  浏览/下载：203/0  |  提交时间：2020/06/30
tissue specific regulatory network  non-coding element  plateau zokor  non-model species  
IDLDA: An Improved Diffusion Model for Predicting LncRNA-Disease Associations 期刊论文
FRONTIERS IN GENETICS, 2019, 卷号: 10, 页码: 10
作者:  Wang, Qi;  Yan, Guiying
收藏  |  浏览/下载：172/0  |  提交时间：2020/05/24
long non-coding RNA  disease  association prediction  computational prediction model  diffusion model  
NRDTD: a database for clinically or experimentally supported non-coding RNAs and drug targets associations 期刊论文
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION, 2017, 页码: 6
作者:  Chen, Xing;  Sun, Ya-Zhou;  Zhang, De-Hong;  Li, Jian-Qiang;  Yan, Gui-Ying;  An, Ji-Yong;  You, Zhu-Hong
收藏  |  浏览/下载：159/0  |  提交时间：2018/07/30
Comparative DNA methylation analysis to decipher common and cell type-specific patterns among multiple cell types 期刊论文
BRIEFINGS IN FUNCTIONAL GENOMICS, 2016, 卷号: 15, 期号: 6, 页码: 399-407
作者:  Yang, Xiaofei;  Shao, Xiaojian;  Gao, Lin;  Zhang, Shihua
收藏  |  浏览/下载：166/0  |  提交时间：2018/07/30
DNA methylation patterns  differentially methylation regions  comparative studies  tissue-specific methylation  cancer epigenomics  
A Two-Stage Method to Identify Joint Modules From Matched MicroRNA and mRNA Expression Data 期刊论文
IEEE TRANSACTIONS ON NANOBIOSCIENCE, 2016, 卷号: 15, 期号: 4, 页码: 362-370
作者:  Min, Wenwen;  Liu, Juan;  Luo, Fei;  Zhang, Shihua
收藏  |  浏览/下载：171/0  |  提交时间：2018/07/30
L-0-penalized singular value decomposition (L-0-SVD)  miRNA cluster  miRNA-gene joint module  multiple-output sparse group lasso  
Modeling post-transcriptional regulation activity of small non-coding RNAs in Escherichia coli 期刊论文
BMC Bioinformatics, 2009, 卷号: 10, 期号: Suppl 4
作者:  Wang,Rui-Sheng;  Jin,Guangxu;  Zhang,Xiang-Sun;  Chen,Luonan
收藏  |  浏览/下载：109/0  |  提交时间：2018/07/30