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A Branch Point on Differentiation Trajectory is the Bifurcating Event Revealed by Dynamical Network Biomarker Analysis of Single-Cell Data 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 2, 页码: 366-375
Authors:  Chen, Ziwei;  Bai, Xiangqi;  Ma, Liang;  Wang, Xiawei;  Liu, Xiuqin;  Liu, Yuting;  Chen, Luonan;  Wan, Lin
Favorite  |  View/Download:29/0  |  Submit date:2020/05/24
Trajectory  Heuristic algorithms  Mice  Correlation  Reactive power  Pseudo temporal trajectory  branch point  DNB theory  reconstruction  single-cell data  bifurcation  dynamical system  
zokordbtissuespecificregulatorynetworkannotationfornoncodingelementsofplateauzokor 期刊论文
quantitativebiology, 2020, 卷号: 8, 期号: 1, 页码: 43-50
Authors:  Xin Jingxue;  Hao Junjun;  Chen Lang;  Zhang Tao;  Li Lei;  Chen Luonan;  Zhao Wenmin;  Lu Xuemei;  Shi Peng;  Wang Yong
Favorite  |  View/Download:55/0  |  Submit date:2020/06/30
tissue specific regulatory network  non-coding element  plateau zokor  non-model species  
ZokorDB: tissue specific regulatory network annotation for non-coding elements of plateau zokor 期刊论文
定量生物学:英文版, 2020, 卷号: 8.0, 期号: 1.0, 页码: 43-50
Authors:  Jingxue Xin;  Junjun Hao;  Lang Chen;  Tao Zhang;  Lei Li;  Luonan Chen;  Wenmin Zhao;  Xuemei Lu;  Peng Shi;  Yong Wang
Favorite  |  View/Download:27/0  |  Submit date:2021/01/14
tissue  specific  regulatory  network  non-coding  element  plateau  zokor  non-model  species  
Associating lncRNAs with small molecules via bilevel optimization reveals cancer-related lncRNAs 期刊论文
PLOS COMPUTATIONAL BIOLOGY, 2019, 卷号: 15, 期号: 12, 页码: 20
Authors:  Wang, Yongcui;  Chen, Shilong;  Chen, Luonan;  Wang, Yong
Favorite  |  View/Download:35/0  |  Submit date:2020/05/24
Hierarchical graphical model reveals HFR1 bridging circadian rhythm and flower development in Arabidopsis thaliana 期刊论文
NPJ SYSTEMS BIOLOGY AND APPLICATIONS, 2019, 卷号: 5, 页码: 11
Authors:  Duren, Zhana;  Wang, Yaling;  Wang, Jiguang;  Zhao, Xing-Ming;  Lv, Le;  Li, Xiaobo;  Liu, Jingdong;  Zhu, Xin-Guang;  Chen, Luonan;  Wang, Yong
Favorite  |  View/Download:41/0  |  Submit date:2020/05/24
Systems biology intertwines with single cell and AI 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 3
Authors:  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
Favorite  |  View/Download:48/0  |  Submit date:2019/10/28
Systems biology  Network  Data integration  
A Semisupervised Classification Approach for Multidomain Networks With Domain Selection 期刊论文
IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 2019, 卷号: 30, 期号: 1, 页码: 269-283
Authors:  Chen, Chuan;  Xin, Jingxue;  Wang, Yong;  Chen, Luonan;  Ng, Michael K.
Favorite  |  View/Download:83/0  |  Submit date:2019/03/05
Domain selection  multidomain classification  network integration  semisupervised learning  sparsity  
Integrating data- and model-driven strategies in systems biology INTRODUCTION 期刊论文
BMC SYSTEMS BIOLOGY, 2018, 卷号: 12, 页码: 3
Authors:  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
Favorite  |  View/Download:47/0  |  Submit date:2018/07/30
Integrating data- and model-driven strategies in systems biology 期刊论文
BMC Systems Biology, 2018, 卷号: 12, 期号: Suppl 4
Authors:  Wang,Yong;  Zhang,Xiang-Sun;  Chen,Luonan
Favorite  |  View/Download:76/0  |  Submit date:2018/07/30
Integrating data- and model-driven strategies in systems biology INTRODUCTION 期刊论文
BMC SYSTEMS BIOLOGY, 2018, 卷号: 12
Authors:  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
Favorite  |  View/Download:36/0  |  Submit date:2019/12/31