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Reusability report: Compressing regulatory networks to vectors for interpreting gene expression and genetic variants 期刊论文
NATURE MACHINE INTELLIGENCE, 2021, 卷号: 3, 期号: 7, 页码: 576-580
Authors:  Zeng, Wanwen;  Xin, Jingxue;  Jiang, Rui;  Wang, Yong
Favorite  |  View/Download:2/0  |  Submit date:2021/10/26
Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation 期刊论文
NATURE COMMUNICATIONS, 2020, 卷号: 11, 期号: 1, 页码: 20
Authors:  Xin, Jingxue;  Zhang, Hui;  He, Yaoxi;  Duren, Zhana;  Bai, Caijuan;  Chen, Lang;  Luo, Xin;  Yan, Dong-Sheng;  Zhang, Chaoyu;  Zhu, Xiang;  Yuan, Qiuyue;  Feng, Zhanying;  Cui, Chaoying;  Qi, Xuebin;  Ouzhuluobu;  Wong, Wing Hung;  Wang, Yong;  Su, Bing
Favorite  |  View/Download:11/0  |  Submit date:2021/01/14
Time course regulatory analysis based on paired expression and chromatin accessibility data 期刊论文
GENOME RESEARCH, 2020, 卷号: 30, 期号: 4, 页码: 622-634
Authors:  Duren, Zhana;  Chen, Xi;  Xin, Jingxue;  Wang, Yong;  Wong, Wing Hung
Favorite  |  View/Download:33/0  |  Submit date:2020/06/30
zokordbtissuespecificregulatorynetworkannotationfornoncodingelementsofplateauzokor 期刊论文
quantitativebiology, 2020, 卷号: 8, 期号: 1, 页码: 43-50
Authors:  Xin Jingxue;  Hao Junjun;  Chen Lang;  Zhang Tao;  Li Lei;  Chen Luonan;  Zhao Wenmin;  Lu Xuemei;  Shi Peng;  Wang Yong
Favorite  |  View/Download:53/0  |  Submit date:2020/06/30
tissue specific regulatory network  non-coding element  plateau zokor  non-model species  
ZokorDB: tissue specific regulatory network annotation for non-coding elements of plateau zokor 期刊论文
定量生物学:英文版, 2020, 卷号: 8.0, 期号: 1.0, 页码: 43-50
Authors:  Jingxue Xin;  Junjun Hao;  Lang Chen;  Tao Zhang;  Lei Li;  Luonan Chen;  Wenmin Zhao;  Xuemei Lu;  Peng Shi;  Yong Wang
Favorite  |  View/Download:27/0  |  Submit date:2021/01/14
tissue  specific  regulatory  network  non-coding  element  plateau  zokor  non-model  species  
TFAP2C-and p63-Dependent Networks Sequentially Rearrange Chromatin Landscapes to Drive Human Epidermal Lineage Commitment 期刊论文
CELL STEM CELL, 2019, 卷号: 24, 期号: 2, 页码: 271-+
Authors:  Li, Lingjie;  Wang, Yong;  Torkelson, Jessica L.;  Shankar, Gautam;  Pattison, Jillian M.;  Zhen, Hanson H.;  Fang, Fengqin;  Duren, Zhana;  Xin, Jingxue;  Gaddam, Sadhana;  Melo, Sandra P.;  Piekos, Samantha N.;  Li, Jiang;  Liaw, Eric J.;  Chen, Lang;  Li, Rui;  Wernig, Marius;  Wong, Wing H.;  Chang, Howard Y.;  Oro, Anthony E.
Favorite  |  View/Download:106/0  |  Submit date:2019/03/11
Lipid-gene regulatory network reveals coregulations of triacylglycerol with phosphatidylinositol/lysophosphatidylinositol and with hexosyl-ceramide 期刊论文
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS, 2019, 卷号: 1864, 期号: 2, 页码: 168-180
Authors:  Wang, Wei;  Xin, Jingxue;  Yang, Xiao;  Lam, Sin Man;  Shui, Guanghou;  Wang, Yong;  Huang, Xun
Favorite  |  View/Download:108/0  |  Submit date:2019/03/05
Lipid homeostasis  TAG  PI  HexCer  Metabolic reprogramming  
A Semisupervised Classification Approach for Multidomain Networks With Domain Selection 期刊论文
IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 2019, 卷号: 30, 期号: 1, 页码: 269-283
Authors:  Chen, Chuan;  Xin, Jingxue;  Wang, Yong;  Chen, Luonan;  Ng, Michael K.
Favorite  |  View/Download:83/0  |  Submit date:2019/03/05
Domain selection  multidomain classification  network integration  semisupervised learning  sparsity  
Drosophila TRF2 and TAF9 regulate lipid droplet size and phospholipid fatty acid composition 期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 3, 页码: 21
Authors:  Fan, Wei;  Lam, Sin Man;  Xin, Jingxue;  Yang, Xiao;  Liu, Zhonghua;  Liu, Yuan;  Wang, Yong;  Shui, Guanghou;  Huang, Xun
Favorite  |  View/Download:24/0  |  Submit date:2018/07/30
Identifying network biomarkers based on protein-protein interactions and expression data 期刊论文
BMC MEDICAL GENOMICS, 2015, 卷号: 8, 页码: 11
Authors:  Xin, Jingxue;  Ren, Xianwen;  Chen, Luonan;  Wang, Yong
Favorite  |  View/Download:28/0  |  Submit date:2018/07/30