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MIMIC: an optimization method to identify cell type-specific marker panel for cell sorting 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2021, 卷号: 22, 期号: 6, 页码: 14
作者:  Zou, Meng;  Duren, Zhana;  Yuan, Qiuyue;  Li, Henry;  Hutchins, Andrew Paul;  Wong, Wing Hung;  Wang, Yong
收藏  |  浏览/下载：145/0  |  提交时间：2022/04/02
cell type-specific marker  TFs  surface markers  dimension reduction  hierarchical topology  
Variable selection for a mark-specific additive hazards model using the adaptive LASSO 期刊论文
STATISTICAL METHODS IN MEDICAL RESEARCH, 2021, 页码: 15
作者:  Han, Dongxiao;  Qu, Lianqiang;  Sun, Liuquan;  Sun, Yanqing
收藏  |  浏览/下载：143/0  |  提交时间：2021/10/26
Adaptive LASSO  additive hazards model  competing risks  continuous mark  mark-specific vaccine effects  survival data  
ZokorDB: tissue specific regulatory network annotation for non-coding elements of plateau zokor 期刊论文
定量生物学:英文版, 2020, 卷号: 8.0, 期号: 1.0, 页码: 43-50
作者:  Jingxue Xin;  Junjun Hao;  Lang Chen;  Tao Zhang;  Lei Li;  Luonan Chen;  Wenmin Zhao;  Xuemei Lu;  Peng Shi;  Yong Wang
收藏  |  浏览/下载：175/0  |  提交时间：2021/01/14
tissue  specific  regulatory  network  non-coding  element  plateau  zokor  non-model  species  
zokordbtissuespecificregulatorynetworkannotationfornoncodingelementsofplateauzokor 期刊论文
quantitativebiology, 2020, 卷号: 8, 期号: 1, 页码: 43-50
作者:  Xin Jingxue;  Hao Junjun;  Chen Lang;  Zhang Tao;  Li Lei;  Chen Luonan;  Zhao Wenmin;  Lu Xuemei;  Shi Peng;  Wang Yong
收藏  |  浏览/下载：203/0  |  提交时间：2020/06/30
tissue specific regulatory network  non-coding element  plateau zokor  non-model species  
Reveal cell type-specific regulatory elements and their characterized histone code classes via a hidden Markov model 期刊论文
BMC GENOMICS, 2018, 卷号: 19, 页码: 13
作者:  Wang, Can;  Zhang, Shihua
收藏  |  浏览/下载：251/0  |  提交时间：2019/01/11
Epigenomics  Cell type-specific regulatory elements  Hidden Markov model  Histone modification  
Prediction of subcellular location of apoptosis proteins by incorporating PsePSSM and DCCA coefficient based on LFDA dimensionality reduction 期刊论文
BMC Genomics, 2018, 卷号: 19, 期号: 1
作者:  Yu,Bin;  Li,Shan;  Qiu,Wenying;  Wang,Minghui;  Du,Junwei;  Zhang,Yusen;  Chen,Xing
收藏  |  浏览/下载：177/0  |  提交时间：2018/07/30
Apoptosis proteins  Subcellular localization  Pseudo-position specific scoring matrix  Detrended cross-correlation analysis coefficient  Local fisher discriminant analysis  Support vector machine  
An efficient risk estimator with external information under additive hazards model 期刊论文
ACTA MATHEMATICAE APPLICATAE SINICA-ENGLISH SERIES, 2018, 卷号: 34, 期号: 1, 页码: 35-50
作者:  Wang, Xin;  Xue, Xiao-ming;  Zhou, Jie;  Sun, Liu-quan
收藏  |  浏览/下载：188/0  |  提交时间：2018/07/30
absolute risk  additive hazards model  cause-specific hazard  cohort data  composite hazard rate  external information  
Mark-specific additive hazards regression with continuous marks 期刊论文
LIFETIME DATA ANALYSIS, 2017, 卷号: 23, 期号: 3, 页码: 467-494
作者:  Han, Dongxiao;  Sun, Liuquan;  Sun, Yanqing;  Qi, Li
收藏  |  浏览/下载：165/0  |  提交时间：2018/07/30
Additive hazards model  Competing risks  Confidence bands and tests  Continuous mark  HIV vaccine trial  Mark-specific vaccine effects  Survival data  
Accurate prediction of protein-protein interactions by integrating potential evolutionary information embedded in PSSM profile and discriminative vector machine classifier 期刊论文
ONCOTARGET, 2017, 卷号: 8, 期号: 14, 页码: 23638-23649
作者:  Li, Zheng-Wei;  You, Zhu-Hong;  Chen, Xing;  Li, Li-Ping;  Huang, De-Shuang;  Yan, Gui-Ying;  Nie, Ru;  Huang, Yu-An
收藏  |  浏览/下载：149/0  |  提交时间：2018/07/30
disease  position-specific scoring matrix  weber local descriptor  cancer  protein-protein interactions  
Comparative DNA methylation analysis to decipher common and cell type-specific patterns among multiple cell types 期刊论文
BRIEFINGS IN FUNCTIONAL GENOMICS, 2016, 卷号: 15, 期号: 6, 页码: 399-407
作者:  Yang, Xiaofei;  Shao, Xiaojian;  Gao, Lin;  Zhang, Shihua
收藏  |  浏览/下载：166/0  |  提交时间：2018/07/30
DNA methylation patterns  differentially methylation regions  comparative studies  tissue-specific methylation  cancer epigenomics