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Learning with smooth Hinge losses 期刊论文
NEUROCOMPUTING, 2021, 卷号: 463, 页码: 379-387
作者:  Luo, JunRu;  Qiao, Hong;  Zhang, Bo
收藏  |  浏览/下载：121/0  |  提交时间：2022/04/02
Smooth Hinge loss  Convex surrogate loss  Support vector machine  Trust region Newton method  
Probe Efficient Feature Representation of Gapped K-mer Frequency Vectors from Sequences Using Deep Neural Networks 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 2, 页码: 657-667
作者:  Cao, Zhen;  Zhang, Shihua
收藏  |  浏览/下载：190/0  |  提交时间：2020/05/24
DNA  Bioinformatics  Kernel  Feature extraction  Support vector machines  Genomics  Task analysis  Bioinformatics  machine learning  gapped k-mer  deep neural network  transcription factor binding site prediction  
Revealing transcription factor and histone modification co-localization and dynamics across cell lines by integrating ChIP-seq and RNA-seq data 期刊论文
BMC GENOMICS, 2018, 卷号: 19, 页码: 16
作者:  Zhang, Lirong;  Xue, Gaogao;  Liu, Junjie;  Li, Qianzhong;  Wang, Yong
收藏  |  浏览/下载：273/0  |  提交时间：2019/01/11
Transcription factor  Histone modification  Co-localization  Dynamics  
Gly-PseAAC: Identifying protein lysine glycation through sequences 期刊论文
GENE, 2017, 卷号: 602, 页码: 1-7
作者:  Xu, Yan;  Li, Li;  Ding, Jun;  Wu, Ling-Yun;  Mai, Guoqin;  Zhou, Fengfeng
收藏  |  浏览/下载：164/0  |  提交时间：2018/07/30
Glycation  Amino acid propensity  Support Vector Machine  
Accurate prediction of protein-protein interactions by integrating potential evolutionary information embedded in PSSM profile and discriminative vector machine classifier 期刊论文
ONCOTARGET, 2017, 卷号: 8, 期号: 14, 页码: 23638-23649
作者:  Li, Zheng-Wei;  You, Zhu-Hong;  Chen, Xing;  Li, Li-Ping;  Huang, De-Shuang;  Yan, Gui-Ying;  Nie, Ru;  Huang, Yu-An
收藏  |  浏览/下载：149/0  |  提交时间：2018/07/30
disease  position-specific scoring matrix  weber local descriptor  cancer  protein-protein interactions  
RKNNMDA: Ranking-based KNN for MiRNA-Disease Association prediction 期刊论文
RNA BIOLOGY, 2017, 卷号: 14, 期号: 7, 页码: 952-962
作者:  Chen, Xing;  Wu, Qiao-Feng;  Yan, Gui-Ying
收藏  |  浏览/下载：117/0  |  提交时间：2018/07/30
Disease  disease semantic similarity  KNN algorithm  miRNAs  miRNA-disease association  SVM Ranking model  
Improved protein-protein interactions prediction via weighted sparse representation model combining continuous wavelet descriptor and PseAA composition 期刊论文
BMC SYSTEMS BIOLOGY, 2016, 卷号: 10, 页码: 10
作者:  Huang, Yu-An;  You, Zhu-Hong;  Chen, Xing;  Yan, Gui-Ying
收藏  |  浏览/下载：163/0  |  提交时间：2018/07/30
Protein-protein interactions  Protein sequence  Continuous wavelet transform  Sparse representation based classifier  
Improving protein-protein interactions prediction accuracy using protein evolutionary information and relevance vector machine model 期刊论文
PROTEIN SCIENCE, 2016, 卷号: 25, 期号: 10, 页码: 1825-1833
作者:  An, Ji-Yong;  Meng, Fan-Rong;  You, Zhu-Hong;  Chen, Xing;  Yan, Gui-Ying;  Hu, Ji-Pu
收藏  |  浏览/下载：150/0  |  提交时间：2018/07/30
evolutionary information  position specific scoring matrix  proteomics  
Computational probing protein-protein interactions targeting small molecules 期刊论文
BIOINFORMATICS, 2016, 卷号: 32, 期号: 2, 页码: 226-234
作者:  Wang, Yong-Cui;  Chen, Shi-Long;  Deng, Nai-Yang;  Wang, Yong
收藏  |  浏览/下载：134/0  |  提交时间：2018/07/30
Robust and accurate prediction of protein self-interactions from amino acids sequence using evolutionary information 期刊论文
MOLECULAR BIOSYSTEMS, 2016, 卷号: 12, 期号: 12, 页码: 3702-3710
作者:  An, Ji-Yong;  You, Zhu-Hong;  Chen, Xing;  Huang, De-Shuang;  Yan, Guiying;  Wang, Da-Fu
收藏  |  浏览/下载：145/0  |  提交时间：2018/07/30