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Biomarker interaction selection and disease detection based on multivariate gain ratio 期刊论文
BMC BIOINFORMATICS, 2022, 卷号: 23, 期号: 1, 页码: 16
作者:  Chu, Xiao;  Jiang, Mao;  Liu, Zhuo-Jun
收藏  |  浏览/下载：69/0  |  提交时间：2023/02/07
Multivariate gain ratio  Biomarker interaction  Disease detection  
A survey and systematic assessment of computational methods for drug response prediction 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2021, 卷号: 22, 期号: 1, 页码: 232-246
作者:  Chen, Jinyu;  Zhang, Louxin
收藏  |  浏览/下载：222/0  |  提交时间：2021/06/01
Drug response prediction  regression model  low rank matrix factorization based approach  Bayesian inference  deep learning  benchmark  
Integrating distal and proximal information to predict gene expression via a densely connected convolutional neural network 期刊论文
BIOINFORMATICS, 2020, 卷号: 36, 期号: 2, 页码: 496-503
作者:  Zeng, Wanwen;  Wang, Yong;  Jiang, Rui
收藏  |  浏览/下载：179/0  |  提交时间：2020/06/30
Discovering cooperative biomarkers for heterogeneous complex disease diagnoses 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 89-101
作者:  Sun, Duanchen;  Ren, Xianwen;  Ari, Eszter;  Korcsmaros, Tamas;  Csermely, Peter;  Wu, Ling-Yun
收藏  |  浏览/下载：331/0  |  提交时间：2019/03/05
heterogeneous diseases  cancer biomarker  network-based  cooperative biomarker  gene expression  
Predicting disease-related genes by path structure and community structure in protein-protein networks 期刊论文
JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT, 2018, 页码: 22
作者:  Hu, Ke;  Hu, Jing-Bo;  Tang, Liang;  Xiang, Ju;  Ma, Jin-Long;  Gao, Yuan-Yuan;  Li, Hui-Jia;  Zhang, Yan
收藏  |  浏览/下载：156/0  |  提交时间：2019/01/11
random graphs  networks  protein interaction networks  
Network-Regularized Sparse Logistic Regression Models for Clinical Risk Prediction and Biomarker Discovery 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2018, 卷号: 15, 期号: 3, 页码: 944-953
作者:  Min, Wenwen;  Liu, Juan;  Zhang, Shihua
收藏  |  浏览/下载：261/0  |  提交时间：2018/07/30
Sparse logistic regression  network-regularized penalty  survival risk prediction  feature selection  
Gly-PseAAC: Identifying protein lysine glycation through sequences 期刊论文
GENE, 2017, 卷号: 602, 页码: 1-7
作者:  Xu, Yan;  Li, Li;  Ding, Jun;  Wu, Ling-Yun;  Mai, Guoqin;  Zhou, Fengfeng
收藏  |  浏览/下载：183/0  |  提交时间：2018/07/30
Glycation  Amino acid propensity  Support Vector Machine  
Sequence-based prediction of protein-protein interactions using weighted sparse representation model combined with global encoding 期刊论文
BMC BIOINFORMATICS, 2016, 卷号: 17, 页码: 11
作者:  Huang, Yu-An;  You, Zhu-Hong;  Chen, Xing;  Chan, Keith;  Luo, Xin
收藏  |  浏览/下载：133/0  |  提交时间：2018/07/30
Inferring a protein interaction map of Mycobacterium tuberculosis based on sequences and interologs 期刊论文
BMC Bioinformatics, 2012, 卷号: 13, 期号: Suppl 7
作者:  Liu,Zhi-Ping;  Wang,Jiguang;  Qiu,Yu-Qing;  Leung,Ross KK;  Zhang,Xiang-Sun;  Tsui,Stephen KW;  Chen,Luonan
收藏  |  浏览/下载：112/0  |  提交时间：2018/07/30
A unified computational model for revealing and predicting subtle subtypes of cancers 期刊论文
BMC Bioinformatics, 2012, 卷号: 13, 期号: 1
作者:  Ren,Xianwen;  Wang,Yong;  Wang,Jiguang;  Zhang,Xiang-Sun
收藏  |  浏览/下载：150/0  |  提交时间：2018/07/30
Class discovery  Class prediction  Quadratic programming  Cancer