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scTIM: seeking cell-type-indicative marker from single cell RNA-seq data by consensus optimization 期刊论文
BIOINFORMATICS, 2020, 卷号: 36, 期号: 8, 页码: 2474-2485
Authors:  Feng, Zhanying;  Ren, Xianwen;  Fang, Yuan;  Yin, Yining;  Huang, Chutian;  Zhao, Yimin;  Wang, Yong
Favorite  |  View/Download:47/0  |  Submit date:2020/06/30
Discovering cooperative biomarkers for heterogeneous complex disease diagnoses 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 89-101
Authors:  Sun, Duanchen;  Ren, Xianwen;  Ari, Eszter;  Korcsmaros, Tamas;  Csermely, Peter;  Wu, Ling-Yun
Favorite  |  View/Download:58/0  |  Submit date:2019/03/05
heterogeneous diseases  cancer biomarker  network-based  cooperative biomarker  gene expression  
Identifying network biomarkers based on protein-protein interactions and expression data 期刊论文
BMC MEDICAL GENOMICS, 2015, 卷号: 8, 页码: 11
Authors:  Xin, Jingxue;  Ren, Xianwen;  Chen, Luonan;  Wang, Yong
Favorite  |  View/Download:34/0  |  Submit date:2018/07/30
A unified computational model for revealing and predicting subtle subtypes of cancers 期刊论文
BMC Bioinformatics, 2012, 卷号: 13, 期号: 1
Authors:  Ren,Xianwen;  Wang,Yong;  Wang,Jiguang;  Zhang,Xiang-Sun
Favorite  |  View/Download:43/0  |  Submit date:2018/07/30
Class discovery  Class prediction  Quadratic programming  Cancer  
Improving accuracy of protein-protein interaction prediction by considering the converse problem for sequence representation 期刊论文
BMC BIOINFORMATICS, 2011, 卷号: 12, 页码: 9
Authors:  Ren, Xianwen;  Wang, Yong-Cui;  Wang, Yong;  Zhang, Xiang-Sun;  Deng, Nai-Yang
Favorite  |  View/Download:38/0  |  Submit date:2018/07/30
A linear programming model based on network flow for pathway inference 期刊论文
JOURNAL OF SYSTEMS SCIENCE & COMPLEXITY, 2010, 卷号: 23, 期号: 5, 页码: 971-977
Authors:  Ren, Xianwen;  Zhang, Xiang-Sun
Favorite  |  View/Download:16/0  |  Submit date:2018/07/30
Gene expression  linear programming  network flow  pathway inference  protein interaction network  
An information-flow-based model with dissipation, saturation and direction for active pathway inference 期刊论文
BMC SYSTEMS BIOLOGY, 2010, 卷号: 4, 页码: 10
Authors:  Ren, Xianwen;  Zhou, Xiaobo;  Wu, Ling-Yun;  Zhang, Xiang-Sun
Favorite  |  View/Download:37/0  |  Submit date:2018/07/30
alinearprogrammingmodelbasedonnetworkflowforpathwayinference 期刊论文
journalofsystemsscienceandcomplexity, 2010, 卷号: 000, 期号: 005, 页码: 971
Authors:  Ren Xianwen;  Zhang Xiangsun
Favorite  |  View/Download:9/0  |  Submit date:2020/01/10