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Deciphering the Spatial Modular Patterns of Tissues by Integrating Spatial and Single-Cell Transcriptomic Data 期刊论文
JOURNAL OF COMPUTATIONAL BIOLOGY, 2022, 页码: 14
Authors:  Shan, Xu;  Chen, Jinyu;  Dong, Kangning;  Zhou, Wei;  Zhang, Shihua
Favorite  |  View/Download：17/0  |  Submit date：2023/02/07
data integration  single-cell transcriptomics  spatial modular patterns  spatial transcriptomics  
A survey and systematic assessment of computational methods for drug response prediction 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2021, 卷号: 22, 期号: 1, 页码: 232-246
Authors:  Chen, Jinyu;  Zhang, Louxin
Favorite  |  View/Download：138/0  |  Submit date：2021/06/01
Drug response prediction  regression model  low rank matrix factorization based approach  Bayesian inference  deep learning  benchmark  
Matrix Integrative Analysis (MIA) of Multiple Genomic Data for Modular Patterns 期刊论文
FRONTIERS IN GENETICS, 2018, 卷号: 9, 页码: 12
Authors:  Chen, Jinyu;  Zhang, Shihua
Favorite  |  View/Download：140/0  |  Submit date：2018/07/30
bioinformatics  multi-dimensional genomics  matrix integrative analysis  data integration  module discovery  non-negative matrix factorization (NMF)  partial least squares (PLS)  
bmtkatoolkitfordeterminingmodulesinbiologicalbipartitenetworks 期刊论文
quantitativebiology, 2018, 卷号: 6, 期号: 2, 页码: 186
Authors:  Wang Bei;  Chen Jinyu;  Zhang Shihua
Favorite  |  View/Download：195/0  |  Submit date：2020/01/10
Integrative cancer genomics: models, algorithms and analysis 期刊论文
FRONTIERS OF COMPUTER SCIENCE, 2017, 卷号: 11, 期号: 3, 页码: 392-406
Authors:  Chen, Jinyu;  Zhang, Shihua
Favorite  |  View/Download：109/0  |  Submit date：2018/07/30
cancer genomics  model  algorithm  data integration  bioinformatics  computational biology  
integrativecancergenomicsmodelsalgorithmsandanalysis 期刊论文
frontiersofcomputerscience, 2017, 卷号: 11, 期号: 3, 页码: 392
Authors:  Chen Jinyu;  Zhang Shihua
Favorite  |  View/Download：93/0  |  Submit date：2020/01/10
Integrative analysis for identifying joint modular patterns of gene-expression and drug-response data 期刊论文
BIOINFORMATICS, 2016, 卷号: 32, 期号: 11, 页码: 1724-1732
Authors:  Chen, Jinyu;  Zhang, Shihua
Favorite  |  View/Download：110/0  |  Submit date：2018/07/30
Raman Spectroscopy in Colorectal Cancer Diagnostics: Comparison of PCA-LDA and PLS-DA Models 期刊论文
JOURNAL OF SPECTROSCOPY, 2016, 页码: 6
Authors:  Liu, Wenjing;  Sun, Zhaotian;  Chen, Jinyu;  Jing, Chuanbo
Favorite  |  View/Download：89/0  |  Submit date：2018/07/30