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Deciphering the Spatial Modular Patterns of Tissues by Integrating Spatial and Single-Cell Transcriptomic Data 期刊论文
JOURNAL OF COMPUTATIONAL BIOLOGY, 2022, 页码: 14
Authors:  Shan, Xu;  Chen, Jinyu;  Dong, Kangning;  Zhou, Wei;  Zhang, Shihua
Favorite  |  View/Download：17/0  |  Submit date：2023/02/07
data integration  single-cell transcriptomics  spatial modular patterns  spatial transcriptomics  
Deciphering spatial domains from spatially resolved transcriptomics with an adaptive graph attention auto-encoder 期刊论文
NATURE COMMUNICATIONS, 2022, 卷号: 13, 期号: 1, 页码: 12
Authors:  Dong, Kangning;  Zhang, Shihua
Favorite  |  View/Download：68/0  |  Submit date：2022/06/21
Network diffusion for scalable embedding of massive single-cell ATAC-seq data 期刊论文
SCIENCE BULLETIN, 2021, 卷号: 66, 期号: 22, 页码: 2271-2276
Authors:  Dong, Kangning;  Zhang, Shihua
Favorite  |  View/Download：77/0  |  Submit date：2022/04/02
Joint reconstruction of cis-regulatory interaction networks across multiple tissues using single-cell chromatin accessibility data 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2021, 卷号: 22, 期号: 3, 页码: 15
Authors:  Dong, Kangning;  Zhang, Shihua
Favorite  |  View/Download：79/0  |  Submit date：2022/04/02
cis-regulatory interaction networks  single-cell ATAC-seq  Gaussian graphical LASSO