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Determining modular organization of protein interaction networks by maximizing modularity density 期刊论文
BMC SYSTEMS BIOLOGY, 2010, 卷号: 4, 页码: 12
作者:  Zhang, Shihua;  Ning, Xue-Mei;  Ding, Chris;  Zhang, Xiang-Sun
收藏  |  浏览/下载：152/0  |  提交时间：2018/07/30
Detecting disease associated modules and prioritizing active genes based on high throughput data 期刊论文
BMC BIOINFORMATICS, 2010, 卷号: 11, 页码: 12
作者:  Qiu, Yu-Qing;  Zhang, Shihua;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：142/0  |  提交时间：2018/07/30
Disease-Aging Network Reveals Significant Roles of Aging Genes in Connecting Genetic Diseases 期刊论文
PLOS COMPUTATIONAL BIOLOGY, 2009, 卷号: 5, 期号: 9, 页码: 12
作者:  Wang, Jiguang;  Zhang, Shihua;  Wang, Yong;  Chen, Luonan;  Zhang, Xiang-Sun
收藏  |  浏览/下载：150/0  |  提交时间：2018/07/30
A hybrid graph-theoretic method for mining overlapping functional modules in large sparse protein interaction networks 期刊论文
INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, 2009, 卷号: 3, 期号: 1, 页码: 68-84
作者:  Zhang, Shihua;  Liu, Hong-Wei;  Ning, Xue-Mei;  Zhang, Xiang-Sun
收藏  |  浏览/下载：242/0  |  提交时间：2018/07/30
PPI  protein-protein interaction network  network clustering  LGT  line graph transformation  protein complexes  functional modules  data mining  bioinformatics  
Biomolecular network querying: a promising approach in systems biology 期刊论文
BMC SYSTEMS BIOLOGY, 2008, 卷号: 2, 页码: 6
作者:  Zhang, Shihua;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：123/0  |  提交时间：2018/07/30
Discovering functions and revealing mechanisms at molecular level from biological networks 期刊论文
PROTEOMICS, 2007, 卷号: 7, 期号: 16, 页码: 2856-2869
作者:  Zhang, Shihua;  Jin, Guangxu;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：138/0  |  提交时间：2018/07/30
biological network  network analysis  network comparison  network integration  protein interaction network  
Identification of functional modules in a PPI network by clique percolation clustering 期刊论文
COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2006, 卷号: 30, 期号: 6, 页码: 445-451
作者:  Zhang, Shihua;  Ning, Xuemei;  Zhang, Xiang-Sun
收藏  |  浏览/下载：141/0  |  提交时间：2018/07/30
protein-protein interaction (PPI) network  network clustering  protein complexes  functional modules  clique percolation clustering  
Revealing divergent evolution, identifying circular permutations and detecting active-sites by protein structure comparison 期刊论文
BMC STRUCTURAL BIOLOGY, 2006, 卷号: 6, 页码: 14
作者:  Chen, Luonan;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Shihua;  Zhang, Xiang-Sun
收藏  |  浏览/下载：138/0  |  提交时间：2018/07/30
Prediction of protein complexes based on protein interaction data and functional annotation data using kernel methods 期刊论文
COMPUTATIONAL INTELLIGENCE AND BIOINFORMATICS, PT 3, PROCEEDINGS, 2006, 卷号: 4115, 页码: 514-524
作者:  Zhang, Shi-Hua;  Ning, Xue-Mei;  Liu, Hong-Wei;  Zhang, Xiang-Sun
收藏  |  浏览/下载：106/0  |  提交时间：2018/07/30