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Multiple-Tissue and Multilevel Analysis on Differentially Expressed Genes and Differentially Correlated Gene Pairs for HFpEF 期刊论文
FRONTIERS IN GENETICS, 2021, 卷号: 12, 页码: 14
作者:  Zhou, Guofeng;  Sun, Shaoyan;  Yuan, Qiuyue;  Zhang, Run;  Jiang, Ping;  Li, Guangyu;  Wang, Yong;  Li, Xiao
收藏  |  浏览/下载:129/0  |  提交时间:2021/10/26
heart failure with preserved ejection fraction  differentially expressed genes  differentially correlated gene pairs  differential network  molecular docking  
Brief Survey of Biological Network Alignment and a Variant with Incorporation of Functional Annotations 期刊论文
CURRENT BIOINFORMATICS, 2019, 卷号: 14, 期号: 1, 页码: 4-10
作者:  Jing, Fang;  Zhang, Shao-Wu;  Zhang, Shihua
收藏  |  浏览/下载:182/0  |  提交时间:2019/04/02
Biological network  network alignment  gene ontology  alignment graph  optimization  
Predicting disease-related genes by path structure and community structure in protein-protein networks 期刊论文
JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT, 2018, 页码: 22
作者:  Hu, Ke;  Hu, Jing-Bo;  Tang, Liang;  Xiang, Ju;  Ma, Jin-Long;  Gao, Yuan-Yuan;  Li, Hui-Jia;  Zhang, Yan
收藏  |  浏览/下载:147/0  |  提交时间:2019/01/11
random graphs  networks  protein interaction networks  
NetGen: a novel network-based probabilistic generative model for gene set functional enrichment analysis 期刊论文
BMC SYSTEMS BIOLOGY, 2017, 卷号: 11, 页码: 14
作者:  Sun, Duanchen;  Liu, Yinliang;  Zhang, Xiang-Sun;  Wu, Ling-Yun
收藏  |  浏览/下载:134/0  |  提交时间:2018/07/30
Gene ontology  Enrichment analysis  Network-based probabilistic generative model  Integer programming  Complex diseases  
Graphical Features of Functional Genes in Human Protein Interaction Network 期刊论文
IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS, 2016, 卷号: 10, 期号: 3, 页码: 707-720
作者:  Wang, Pei;  Chen, Yao;  Lu, Jinhu;  Wang, Qingyun;  Yu, Xinghuo
收藏  |  浏览/下载:122/0  |  提交时间:2018/07/30
Cluster  disease classification  functional gene  human protein interaction network  receiver operating characteristic (ROC) curve  topological structure  
IIIDB: a database for isoform-isoform interactions and isoform network modules 期刊论文
BMC Genomics, 2015, 卷号: 16, 期号: Suppl 2
作者:  Tseng,Yu-Ting;  Li,Wenyuan;  Chen,Ching-Hsien;  Zhang,Shihua;  Chen,Jeremy JW;  Zhou,Xianghong Jasmine;  Liu,Chun-Chi
收藏  |  浏览/下载:141/0  |  提交时间:2018/07/30
Identifying network biomarkers based on protein-protein interactions and expression data 期刊论文
BMC MEDICAL GENOMICS, 2015, 卷号: 8, 页码: 11
作者:  Xin, Jingxue;  Ren, Xianwen;  Chen, Luonan;  Wang, Yong
收藏  |  浏览/下载:125/0  |  提交时间:2018/07/30
Inferring a protein interaction map of Mycobacterium tuberculosis based on sequences and interologs 期刊论文
BMC Bioinformatics, 2012, 卷号: 13, 期号: Suppl 7
作者:  Liu,Zhi-Ping;  Wang,Jiguang;  Qiu,Yu-Qing;  Leung,Ross KK;  Zhang,Xiang-Sun;  Tsui,Stephen KW;  Chen,Luonan
收藏  |  浏览/下载:104/0  |  提交时间:2018/07/30
An efficient network querying method based on conditional random fields 期刊论文
BIOINFORMATICS, 2011, 卷号: 27, 期号: 22, 页码: 3173-3178
作者:  Huang, Qiang;  Wu, Ling-Yun;  Zhang, Xiang-Sun
收藏  |  浏览/下载:127/0  |  提交时间:2018/07/30
NOA: a novel Network Ontology Analysis method 期刊论文
NUCLEIC ACIDS RESEARCH, 2011, 卷号: 39, 期号: 13, 页码: 12
作者:  Wang, Jiguang;  Huang, Qiang;  Liu, Zhi-Ping;  Wang, Yong;  Wu, Ling-Yun;  Chen, Luonan;  Zhang, Xiang-Sun
收藏  |  浏览/下载:155/0  |  提交时间:2018/07/30