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Prediction of enhancer-promoter interactions using the cross-cell type information and domain adversarial neural network 期刊论文
BMC BIOINFORMATICS, 2020, 卷号: 21, 期号: 1, 页码: 16
作者:  Jing, Fang;  Zhang, Shao-Wu;  Zhang, Shihua
收藏  |  浏览/下载：141/0  |  提交时间：2021/01/14
Enhancer–  promoter interactions  Cell line  Convolutional neural network  Transfer learning  Gradient reversal layer  
Prediction of enhancer–promoter interactions using the cross-cell type information and domain adversarial neural network 期刊论文
BMC Bioinformatics, 2020, 卷号: 21, 期号: 1
作者:  Jing,Fang;  Zhang,Shao-Wu;  Zhang,Shihua
收藏  |  浏览/下载：144/0  |  提交时间：2021/01/14
Enhancer–promoter interactions  Cell line  Convolutional neural network  Transfer learning  Gradient reversal layer  
Asymptotic efficiency and probabilistic error bound for maximum likelihood-based identification of finite impulse response systems with binary-valued observations and unreliable communications 期刊论文
INTERNATIONAL JOURNAL OF ADAPTIVE CONTROL AND SIGNAL PROCESSING, 2020, 页码: 18
作者:  Guo, Jin;  Cheng, Jing;  Xue, Wenchao;  Zhao, Yanlong
收藏  |  浏览/下载：199/0  |  提交时间：2020/10/12
binary-valued observations  FIR systems  packet losses  parameter identification  transmission errors  
Probe Efficient Feature Representation of Gapped K-mer Frequency Vectors from Sequences Using Deep Neural Networks 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 2, 页码: 657-667
作者:  Cao, Zhen;  Zhang, Shihua
收藏  |  浏览/下载：190/0  |  提交时间：2020/05/24
DNA  Bioinformatics  Kernel  Feature extraction  Support vector machines  Genomics  Task analysis  Bioinformatics  machine learning  gapped k-mer  deep neural network  transcription factor binding site prediction  
Two-phase SSU and SKAT in genetic association studies 期刊论文
JOURNAL OF GENETICS, 2020, 卷号: 99, 期号: 1, 页码: 10
作者:  Xue, Yuan;  Ding, Juan;  Wang, Jinjuan;  Zhang, Sanguo;  Pan, Dongdong
收藏  |  浏览/下载：136/0  |  提交时间：2020/05/24
multiple-markers analysis  genetic model  Hardy-Weinberg equilibrium  power  
Integrating distal and proximal information to predict gene expression via a densely connected convolutional neural network 期刊论文
BIOINFORMATICS, 2020, 卷号: 36, 期号: 2, 页码: 496-503
作者:  Zeng, Wanwen;  Wang, Yong;  Jiang, Rui
收藏  |  浏览/下载：167/0  |  提交时间：2020/06/30
ADAPTIVE LOW-NONNEGATIVE-RANK APPROXIMATION FOR STATE AGGREGATION OF MARKOV CHAINS 期刊论文
SIAM JOURNAL ON MATRIX ANALYSIS AND APPLICATIONS, 2020, 卷号: 41, 期号: 1, 页码: 244-278
作者:  Duan, Yaqi;  Wang, Mengdi;  Wen, Zaiwen;  Yuan, Yaxiang
收藏  |  浏览/下载：143/0  |  提交时间：2020/09/23
Markov chain  state aggregation  nonnegative matrix factorization  atomic norm  proximal alternating linearized minimization  
Confidence intervals for Markov chain transition probabilities based on next generation sequencing reads data 期刊论文
QUANTITATIVE BIOLOGY, 2020, 卷号: 8, 期号: 2, 页码: 143-154
作者:  Wan, Lin;  Kang, Xin;  Ren, Jie;  Sun, Fengzhu
收藏  |  浏览/下载：190/0  |  提交时间：2021/01/14
DNA  FREQUENCIES  PREDICTION  Markov chains  next generation sequencing  transition probabilities  confidence intervals