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Interaction-based transcriptome analysis via differential network inference 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2022, 页码: 11
作者:  Leng, Jiacheng;  Wu, Ling-Yun
收藏  |  浏览/下载：48/0  |  提交时间：2023/02/07
differential network inference  differential expression analysis  interaction-based transcriptome analysis  
Importance-Penalized Joint Graphical Lasso (IPJGL): differential network inference via GGMs 期刊论文
BIOINFORMATICS, 2022, 卷号: 38, 期号: 3, 页码: 770-777
作者:  Leng, Jiacheng;  Wu, Ling-Yun
收藏  |  浏览/下载：143/0  |  提交时间：2022/04/02
Structure alignment-based classification of RNA-binding pockets reveals regional RNA recognition motifs on protein surfaces 期刊论文
BMC BIOINFORMATICS, 2017, 卷号: 18, 页码: 13
作者:  Liu, Zhi-Ping;  Liu, Shutang;  Chen, Ruitang;  Huang, Xiaopeng;  Wu, Ling-Yun
收藏  |  浏览/下载：149/0  |  提交时间：2018/07/30
RNA-binding pocket  Local structure classification  Structural alignment  Network clustering  Structure motif  
Corbi: a new R package for biological network alignment and querying 期刊论文
BMC Systems Biology, 2013, 卷号: 7, 期号: Suppl 2
作者:  Huang,Qiang;  Wu,Ling-Yun;  Zhang,Xiang-Sun
收藏  |  浏览/下载：148/0  |  提交时间：2018/07/30
NOA: a novel Network Ontology Analysis method 期刊论文
NUCLEIC ACIDS RESEARCH, 2011, 卷号: 39, 期号: 13, 页码: 12
作者:  Wang, Jiguang;  Huang, Qiang;  Liu, Zhi-Ping;  Wang, Yong;  Wu, Ling-Yun;  Chen, Luonan;  Zhang, Xiang-Sun
收藏  |  浏览/下载：156/0  |  提交时间：2018/07/30
Semi-supervised drug-protein interaction prediction from heterogeneous biological spaces 期刊论文
BMC SYSTEMS BIOLOGY, 2010, 卷号: 4, 页码: 12
作者:  Xia, Zheng;  Wu, Ling-Yun;  Zhou, Xiaobo;  Wong, Stephen T. C.
收藏  |  浏览/下载：132/0  |  提交时间：2018/07/30
Prediction of protein-RNA binding sites by a random forest method with combined features 期刊论文
BIOINFORMATICS, 2010, 卷号: 26, 期号: 13, 页码: 1616-1622
作者:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：144/0  |  提交时间：2018/07/30
An information-flow-based model with dissipation, saturation and direction for active pathway inference 期刊论文
BMC SYSTEMS BIOLOGY, 2010, 卷号: 4, 页码: 10
作者:  Ren, Xianwen;  Zhou, Xiaobo;  Wu, Ling-Yun;  Zhang, Xiang-Sun
收藏  |  浏览/下载：123/0  |  提交时间：2018/07/30
Bridging protein local structures and protein functions 期刊论文
AMINO ACIDS, 2008, 卷号: 35, 期号: 3, 页码: 627-650
作者:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：135/0  |  提交时间：2018/07/30
functional genomics  functional motifs  local structures  protein function prediction  
Predicting gene ontology functions from protein's regional surface structures 期刊论文
BMC BIOINFORMATICS, 2007, 卷号: 8, 页码: 13
作者:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Chen, Luonan;  Zhang, Xiang-Sun
收藏  |  浏览/下载：160/0  |  提交时间：2018/07/30