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NetGen: a novel network-based probabilistic generative model for gene set functional enrichment analysis 期刊论文
BMC SYSTEMS BIOLOGY, 2017, 卷号: 11, 页码: 14
作者:  Sun, Duanchen;  Liu, Yinliang;  Zhang, Xiang-Sun;  Wu, Ling-Yun
收藏  |  浏览/下载：134/0  |  提交时间：2018/07/30
Gene ontology  Enrichment analysis  Network-based probabilistic generative model  Integer programming  Complex diseases  
Gly-PseAAC: Identifying protein lysine glycation through sequences 期刊论文
GENE, 2017, 卷号: 602, 页码: 1-7
作者:  Xu, Yan;  Li, Li;  Ding, Jun;  Wu, Ling-Yun;  Mai, Guoqin;  Zhou, Fengfeng
收藏  |  浏览/下载：170/0  |  提交时间：2018/07/30
Glycation  Amino acid propensity  Support Vector Machine  
Structure alignment-based classification of RNA-binding pockets reveals regional RNA recognition motifs on protein surfaces 期刊论文
BMC BIOINFORMATICS, 2017, 卷号: 18, 页码: 13
作者:  Liu, Zhi-Ping;  Liu, Shutang;  Chen, Ruitang;  Huang, Xiaopeng;  Wu, Ling-Yun
收藏  |  浏览/下载：157/0  |  提交时间：2018/07/30
RNA-binding pocket  Local structure classification  Structural alignment  Network clustering  Structure motif  
iSulf-Cys: Prediction of S-sulfenylation Sites in Proteins with Physicochemical Properties of Amino Acids 期刊论文
PLOS ONE, 2016, 卷号: 11, 期号: 4, 页码: 9
作者:  Xu, Yan;  Ding, Jun;  Wu, Ling-Yun
收藏  |  浏览/下载：121/0  |  提交时间：2018/07/30
Phogly-PseAAC: Prediction of lysine phosphoglycerylation in proteins incorporating with position-specific propensity 期刊论文
JOURNAL OF THEORETICAL BIOLOGY, 2015, 卷号: 379, 页码: 10-15
作者:  Xu, Yan;  Ding, Ya-Xin;  Ding, Jun;  Wu, Ling-Yun;  Deng, Nai-Yang
收藏  |  浏览/下载：138/0  |  提交时间：2018/07/30
Amino acid propensity  F-score  Phosphoglycerylation  
iSuc-PseAAC: predicting lysine succinylation in proteins by incorporating peptide position-specific propensity 期刊论文
SCIENTIFIC REPORTS, 2015, 卷号: 5, 页码: 6
作者:  Xu, Yan;  Ding, Ya-Xin;  Ding, Jun;  Lei, Ya-Hui;  Wu, Ling-Yun;  Deng, Nai-Yang
收藏  |  浏览/下载：132/0  |  提交时间：2018/07/30
Discovery of co-occurring driver pathways in cancer 期刊论文
BMC Bioinformatics, 2014, 卷号: 15, 期号: 1
作者:  Zhang,Junhua;  Wu,Ling-Yun;  Zhang,Xiang-Sun;  Zhang,Shihua
收藏  |  浏览/下载：140/0  |  提交时间：2018/07/30
Corbi: a new R package for biological network alignment and querying 期刊论文
BMC Systems Biology, 2013, 卷号: 7, 期号: Suppl 2
作者:  Huang,Qiang;  Wu,Ling-Yun;  Zhang,Xiang-Sun
收藏  |  浏览/下载：150/0  |  提交时间：2018/07/30
An efficient network querying method based on conditional random fields 期刊论文
BIOINFORMATICS, 2011, 卷号: 27, 期号: 22, 页码: 3173-3178
作者:  Huang, Qiang;  Wu, Ling-Yun;  Zhang, Xiang-Sun
收藏  |  浏览/下载：130/0  |  提交时间：2018/07/30
NOA: a novel Network Ontology Analysis method 期刊论文
NUCLEIC ACIDS RESEARCH, 2011, 卷号: 39, 期号: 13, 页码: 12
作者:  Wang, Jiguang;  Huang, Qiang;  Liu, Zhi-Ping;  Wang, Yong;  Wu, Ling-Yun;  Chen, Luonan;  Zhang, Xiang-Sun
收藏  |  浏览/下载：159/0  |  提交时间：2018/07/30