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Annotating regulatory elements by heterogeneous network embedding 期刊论文
BIOINFORMATICS, 2022, 页码: 13
Authors:  Lu, Yurun;  Feng, Zhanying;  Zhang, Songmao;  Wang, Yong
Favorite  |  View/Download:53/0  |  Submit date:2022/06/21
Multiple-Tissue and Multilevel Analysis on Differentially Expressed Genes and Differentially Correlated Gene Pairs for HFpEF 期刊论文
FRONTIERS IN GENETICS, 2021, 卷号: 12, 页码: 14
Authors:  Zhou, Guofeng;  Sun, Shaoyan;  Yuan, Qiuyue;  Zhang, Run;  Jiang, Ping;  Li, Guangyu;  Wang, Yong;  Li, Xiao
Favorite  |  View/Download:66/0  |  Submit date:2021/10/26
heart failure with preserved ejection fraction  differentially expressed genes  differentially correlated gene pairs  differential network  molecular docking  
Controllability Analysis of a Gene Network for Arabidopsis thaliana Reveals Characteristics of Functional Gene Families 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2019, 卷号: 16, 期号: 3, 页码: 912-924
Authors:  Wang, Pei;  Wang, Daojie;  Lu, Jinhu
Favorite  |  View/Download:118/0  |  Submit date:2020/01/10
Structural controllability  Arabidopsis thaliana  gene network  functional gene  enrichment analysis  
Revealing transcription factor and histone modification co-localization and dynamics across cell lines by integrating ChIP-seq and RNA-seq data 期刊论文
BMC GENOMICS, 2018, 卷号: 19, 页码: 16
Authors:  Zhang, Lirong;  Xue, Gaogao;  Liu, Junjie;  Li, Qianzhong;  Wang, Yong
Favorite  |  View/Download:191/0  |  Submit date:2019/01/11
Transcription factor  Histone modification  Co-localization  Dynamics  
CEA: Combination-based gene set functional enrichment analysis 期刊论文
SCIENTIFIC REPORTS, 2018, 卷号: 8, 页码: 13
Authors:  Sun, Duanchen;  Liu, Yinliang;  Zhang, Xiang-Sun;  Wu, Ling-Yun
Favorite  |  View/Download:170/0  |  Submit date:2018/10/07
NetGen: a novel network-based probabilistic generative model for gene set functional enrichment analysis 期刊论文
BMC SYSTEMS BIOLOGY, 2017, 卷号: 11, 页码: 14
Authors:  Sun, Duanchen;  Liu, Yinliang;  Zhang, Xiang-Sun;  Wu, Ling-Yun
Favorite  |  View/Download:88/0  |  Submit date:2018/07/30
Gene ontology  Enrichment analysis  Network-based probabilistic generative model  Integer programming  Complex diseases  
A Novel Dual Eigen-Analysis of Mouse Multi-Tissues' Expression Profiles Unveils New Perspectives into Type 2 Diabetes 期刊论文
SCIENTIFIC REPORTS, 2017, 卷号: 7, 页码: 12
Authors:  Li, Lei M.;  Liu, Xiuxiu;  Wang, Lin;  Wang, Yong;  Liu, Xiuqin;  Tian, Xue;  Gong, Fuzhou;  Shen, Li;  Peng, Xiao-ding
Favorite  |  View/Download:114/0  |  Submit date:2018/07/30
Functional connectivity decreases in autism in emotion, self, and face circuits identified by Knowledge-based Enrichment Analysis 期刊论文
NEUROIMAGE, 2017, 卷号: 148, 页码: 169-178
Authors:  Cheng, Wei;  Rolls, Edmund T.;  Zhang, Jie;  Sheng, Wenbo;  Ma, Liang;  Wan, Lin;  Luo, Qiang;  Feng, Jianfeng
Favorite  |  View/Download:71/0  |  Submit date:2018/07/30
Autism spectrum disorder  Neurosynth database  Orbitofrontal cortex  Precuneus  Resting state fMRI  
IIIDB: a database for isoform-isoform interactions and isoform network modules 期刊论文
BMC Genomics, 2015, 卷号: 16, 期号: Suppl 2
Authors:  Tseng,Yu-Ting;  Li,Wenyuan;  Chen,Ching-Hsien;  Zhang,Shihua;  Chen,Jeremy JW;  Zhou,Xianghong Jasmine;  Liu,Chun-Chi
Favorite  |  View/Download:80/0  |  Submit date:2018/07/30
gomafunctionalenrichmentanalysistoolbasedongomodules 期刊论文
chinesejournalofcancer, 2013, 卷号: 32, 期号: 4, 页码: 195
Authors:  Huang Qiang;  Wu Lingyun;  Wang Yong;  Zhang Xiangsun
Favorite  |  View/Download:104/0  |  Submit date:2020/01/10