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MIMIC: an optimization method to identify cell type-specific marker panel for cell sorting 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2021, 卷号: 22, 期号: 6, 页码: 14
作者:  Zou, Meng;  Duren, Zhana;  Yuan, Qiuyue;  Li, Henry;  Hutchins, Andrew Paul;  Wong, Wing Hung;  Wang, Yong
收藏  |  浏览/下载：146/0  |  提交时间：2022/04/02
cell type-specific marker  TFs  surface markers  dimension reduction  hierarchical topology  
OpenAnnotate: a web server to annotate the chromatin accessibility of genomic regions 期刊论文
NUCLEIC ACIDS RESEARCH, 2021, 卷号: 49, 期号: W1, 页码: W483-W490
作者:  Chen, Shengquan;  Liu, Qiao;  Cui, Xuejian;  Feng, Zhanying;  Li, Chunquan;  Wang, Xiaowo;  Zhang, Xuegong;  Wang, Yong;  Jiang, Rui
收藏  |  浏览/下载：142/0  |  提交时间：2021/10/26
3Scover: Identifying Safeguard TF from Cell Type-TF Specificity Network by an Extended Minimum Set Cover Model 期刊论文
ISCIENCE, 2020, 卷号: 23, 期号: 6, 页码: 31
作者:  Yuan, Qiuyue;  Wang, Yong
收藏  |  浏览/下载：148/0  |  提交时间：2020/09/23
scTIM: seeking cell-type-indicative marker from single cell RNA-seq data by consensus optimization 期刊论文
BIOINFORMATICS, 2020, 卷号: 36, 期号: 8, 页码: 2474-2485
作者:  Feng, Zhanying;  Ren, Xianwen;  Fang, Yuan;  Yin, Yining;  Huang, Chutian;  Zhao, Yimin;  Wang, Yong
收藏  |  浏览/下载：182/0  |  提交时间：2020/06/30
ELF: Extract Landmark Features By Optimizing Topology Maintenance, Redundancy, and Specificity 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 2, 页码: 411-421
作者:  Feng, Zhan-Ying;  Wang, Yong
收藏  |  浏览/下载：186/0  |  提交时间：2020/05/24
Feature extraction  Topology  Ground penetrating radar  Geophysical measurement techniques  Redundancy  Maintenance engineering  Manganese  Feature selection  topology maintenance  optimization  single cell  
Revealing transcription factor and histone modification co-localization and dynamics across cell lines by integrating ChIP-seq and RNA-seq data 期刊论文
BMC GENOMICS, 2018, 卷号: 19, 页码: 16
作者:  Zhang, Lirong;  Xue, Gaogao;  Liu, Junjie;  Li, Qianzhong;  Wang, Yong
收藏  |  浏览/下载：273/0  |  提交时间：2019/01/11
Transcription factor  Histone modification  Co-localization  Dynamics  
Computational probing protein-protein interactions targeting small molecules 期刊论文
BIOINFORMATICS, 2016, 卷号: 32, 期号: 2, 页码: 226-234
作者:  Wang, Yong-Cui;  Chen, Shi-Long;  Deng, Nai-Yang;  Wang, Yong
收藏  |  浏览/下载：134/0  |  提交时间：2018/07/30
Revealing metabolite biomarkers for acupuncture treatment by linear programming based feature selection 期刊论文
BMC Systems Biology, 2012, 卷号: 6, 期号: Suppl 1
作者:  Wang,Yong;  Wu,Qiao-Feng;  Chen,Chen;  Wu,Ling-Yun;  Yan,Xian-Zhong;  Yu,Shu-Guang;  Zhang,Xiang-Sun;  Liang,Fan-Rong
收藏  |  浏览/下载：166/0  |  提交时间：2018/07/30
A computational procedure for identifying master regulator candidates: a case study on diabetes progression in Goto-Kakizaki rats 期刊论文
BMC Systems Biology, 2012, 卷号: 6, 期号: Suppl 1
作者:  Piao,Guanying;  Saito,Shigeru;  Sun,Yidan;  Liu,Zhi-Ping;  Wang,Yong;  Han,Xiao;  Wu,Jiarui;  Zhou,Huarong;  Chen,Luonan;  Horimoto,Katsuhisa
收藏  |  浏览/下载：148/0  |  提交时间：2018/07/30
Improving accuracy of protein-protein interaction prediction by considering the converse problem for sequence representation 期刊论文
BMC BIOINFORMATICS, 2011, 卷号: 12, 页码: 9
作者:  Ren, Xianwen;  Wang, Yong-Cui;  Wang, Yong;  Zhang, Xiang-Sun;  Deng, Nai-Yang
收藏  |  浏览/下载：136/0  |  提交时间：2018/07/30