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Annotating regulatory elements by heterogeneous network embedding 期刊论文
BIOINFORMATICS, 2022, 页码: 13
作者:  Lu, Yurun;  Feng, Zhanying;  Zhang, Songmao;  Wang, Yong
收藏  |  浏览/下载：139/0  |  提交时间：2022/06/21
Computational probing protein-protein interactions targeting small molecules 期刊论文
BIOINFORMATICS, 2016, 卷号: 32, 期号: 2, 页码: 226-234
作者:  Wang, Yong-Cui;  Chen, Shi-Long;  Deng, Nai-Yang;  Wang, Yong
收藏  |  浏览/下载：134/0  |  提交时间：2018/07/30
Kernel-based data fusion improves the drug-protein interaction prediction 期刊论文
COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2011, 卷号: 35, 期号: 6, 页码: 353-362
作者:  Wang, Yong-Cui;  Zhang, Chun-Hua;  Deng, Nai-Yang;  Wang, Yong
收藏  |  浏览/下载：142/0  |  提交时间：2018/07/30
Drug-target interaction  Chemical space  Pharmacological space  Therapeutic space  Genomic space  Kernel function  Support vector machine  
SANA: an algorithm for sequential and non-sequential protein structure alignment 期刊论文
AMINO ACIDS, 2010, 卷号: 39, 期号: 2, 页码: 417-425
作者:  Wang, Lin;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：154/0  |  提交时间：2018/07/30
Protein structure alignment  Fold comparison  Circular permutation  Functional sites  
Computationally Probing Drug-Protein Interactions Via Support Vector Machine 期刊论文
LETTERS IN DRUG DESIGN & DISCOVERY, 2010, 卷号: 7, 期号: 5, 页码: 370-378
作者:  Wang, Yong-Cui;  Yang, Zhi-Xia;  Wang, Yong;  Deng, Nai-Yang
收藏  |  浏览/下载：118/0  |  提交时间：2018/07/30
Drug-target interaction  Chemical structure  Protein sequence  Imbalance problem  Support vector machine  
Evaluating Protein Similarity from Coarse Structures 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2009, 卷号: 6, 期号: 4, 页码: 583-593
作者:  Wang, Yong;  Wu, Ling-Yun;  Zhang, Ji-Hong;  Zhan, Zhong-Wei;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：152/0  |  提交时间：2018/07/30
Protein structure  structure comparison  protein surface  
Clustering complex networks and biological networks by nonnegative matrix factorization with various similarity measures 期刊论文
NEUROCOMPUTING, 2008, 卷号: 72, 期号: 1-3, 页码: 134-141
作者:  Wang, Rui-Sheng;  Zhang, Shihua;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：135/0  |  提交时间：2018/07/30
Complex networks  Biological networks  Community structure  Nonnegative matrix factorization  Similarity measure  
Analysis of protein surface patterns by pocket similarity network 期刊论文
PROTEIN AND PEPTIDE LETTERS, 2008, 卷号: 15, 期号: 5, 页码: 448-455
作者:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：161/0  |  提交时间：2018/07/30
protein surface pattern  pocket similarity  complex network  functional genomics  systems biology  
Predicting gene ontology functions from protein's regional surface structures 期刊论文
BMC BIOINFORMATICS, 2007, 卷号: 8, 页码: 13
作者:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Chen, Luonan;  Zhang, Xiang-Sun
收藏  |  浏览/下载：160/0  |  提交时间：2018/07/30
Alignment of molecular networks by integer quadratic programming 期刊论文
BIOINFORMATICS, 2007, 卷号: 23, 期号: 13, 页码: 1631-1639
作者:  Zhenping, Li;  Zhang, Shihua;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：132/0  |  提交时间：2018/07/30