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Analysis of protein surface patterns by pocket similarity network
Liu, Zhi-Ping1; Wu, Ling-Yun1; Wang, Yong1; Zhang, Xiang-Sun1; Chen, Luonan2,3,4,5
2008-06-01
Source PublicationPROTEIN AND PEPTIDE LETTERS
ISSN0929-8665
Volume15Issue:5Pages:448-455
AbstractIn this work, in order to reveal protein surface patterns in a systems biology framework, we analyze the similarity among the surface cavities by investigating the features of the pocket similarity network such as the community structure, the small-world property, the scale-free characteristic, and the hubs.
Keywordprotein surface pattern pocket similarity complex network functional genomics systems biology
Language英语
WOS Research AreaBiochemistry & Molecular Biology
WOS SubjectBiochemistry & Molecular Biology
WOS IDWOS:000257467200005
PublisherBENTHAM SCIENCE PUBL LTD
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Document Type期刊论文
Identifierhttp://ir.amss.ac.cn/handle/2S8OKBNM/6395
Collection应用数学研究所
Corresponding AuthorWu, Ling-Yun
Affiliation1.Chinese Acad Sci, Acad Math & Syst Sci, Beijing 100080, Peoples R China
2.Shanghai Univ, Inst Syst Biol, Shanghai 200444, Peoples R China
3.Osaka Sangyo Univ, Osaka 5748530, Japan
4.JST, ERATO Aihara Complex Modelling Project, Tokyo 1510064, Japan
5.Univ Tokyo, Inst Ind Sci, Tokyo 1538505, Japan
Recommended Citation
GB/T 7714
Liu, Zhi-Ping,Wu, Ling-Yun,Wang, Yong,et al. Analysis of protein surface patterns by pocket similarity network[J]. PROTEIN AND PEPTIDE LETTERS,2008,15(5):448-455.
APA Liu, Zhi-Ping,Wu, Ling-Yun,Wang, Yong,Zhang, Xiang-Sun,&Chen, Luonan.(2008).Analysis of protein surface patterns by pocket similarity network.PROTEIN AND PEPTIDE LETTERS,15(5),448-455.
MLA Liu, Zhi-Ping,et al."Analysis of protein surface patterns by pocket similarity network".PROTEIN AND PEPTIDE LETTERS 15.5(2008):448-455.
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