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OpenAnnotate: a web server to annotate the chromatin accessibility of genomic regions 期刊论文
NUCLEIC ACIDS RESEARCH, 2021, 卷号: 49, 期号: W1, 页码: W483-W490
作者:  Chen, Shengquan;  Liu, Qiao;  Cui, Xuejian;  Feng, Zhanying;  Li, Chunquan;  Wang, Xiaowo;  Zhang, Xuegong;  Wang, Yong;  Jiang, Rui
收藏  |  浏览/下载：145/0  |  提交时间：2021/10/26
Identification of Common Driver Gene Modules and Associations between Cancers through Integrated Network Analysis 期刊论文
GLOBAL CHALLENGES, 2021, 页码: 13
作者:  Gao, Bo;  Zhao, Yue;  Gao, Yonghang;  Li, Guojun;  Wu, Ling-Yun
收藏  |  浏览/下载：201/0  |  提交时间：2021/10/26
driver gene module  gene mutation  mutual exclusivity  network analysis  signaling pathway  
Unambiguous Phosphosite Localization through the Combination of Trypsin and LysargiNase Mirror Spectra in a Large-Scale Phosphoproteome Study 期刊论文
JOURNAL OF PROTEOME RESEARCH, 2020, 卷号: 19, 期号: 6, 页码: 2185-2194
作者:  Xu, Feng;  Yu, Li;  Peng, Xuehui;  Zhang, Junling;  Li, Suzhen;  Liu, Shu;  Yin, Yanan;  An, Zhiwu;  Wang, Fuqiang;  Fu, Yan;  Xu, Ping
收藏  |  浏览/下载：202/0  |  提交时间：2020/09/23
trypsin  LysargiNase  combined spectra  ion coverage  phosphosite localization  PTMiner  
Integrating distal and proximal information to predict gene expression via a densely connected convolutional neural network 期刊论文
BIOINFORMATICS, 2020, 卷号: 36, 期号: 2, 页码: 496-503
作者:  Zeng, Wanwen;  Wang, Yong;  Jiang, Rui
收藏  |  浏览/下载：172/0  |  提交时间：2020/06/30
Learning common and specific patterns from data of multiple interrelated biological scenarios with matrix factorization 期刊论文
NUCLEIC ACIDS RESEARCH, 2019, 卷号: 47, 期号: 13, 页码: 6606-6617
作者:  Zhang, Lihua;  Zhang, Shihua
收藏  |  浏览/下载：196/0  |  提交时间：2020/01/10
Forecasting container throughput based on wavelet transforms within a decomposition-ensemble methodology: a case study of China 期刊论文
MARITIME POLICY & MANAGEMENT, 2019, 卷号: 46, 期号: 2, 页码: 178-200
作者:  Xie, Gang;  Qian, Yatong;  Yang, Hewei
收藏  |  浏览/下载：170/0  |  提交时间：2019/03/05
Container throughput  wavelet transform  data characteristic analysis  time series forecasting  decomposition-ensemble methodology  
Matrix Integrative Analysis (MIA) of Multiple Genomic Data for Modular Patterns 期刊论文
FRONTIERS IN GENETICS, 2018, 卷号: 9, 页码: 12
作者:  Chen, Jinyu;  Zhang, Shihua
收藏  |  浏览/下载：181/0  |  提交时间：2018/07/30
bioinformatics  multi-dimensional genomics  matrix integrative analysis  data integration  module discovery  non-negative matrix factorization (NMF)  partial least squares (PLS)  
The Discovery of Mutated Driver Pathways in Cancer: Models and Algorithms 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2018, 卷号: 15, 期号: 3, 页码: 988-998
作者:  Zhang, Junhua;  Zhang, Shihua
收藏  |  浏览/下载：213/0  |  提交时间：2018/07/30
Bioinformatics  cancer genomics  driver gene  driver pathway  mutual exclusivity  co-occurring mutation  
A novel hybrid decomposition-ensemble model based on VMD and HGWO for container throughput forecasting 期刊论文
APPLIED MATHEMATICAL MODELLING, 2018, 卷号: 57, 页码: 163-178
作者:  Niu, Mingfei;  Hu, Yueyong;  Sun, Shaolong;  Liu, Yu
收藏  |  浏览/下载：149/0  |  提交时间：2018/07/30
Container throughput forecasting  Variational mode decomposition  Support vector regression  Hybridizing grey wolf optimization  Hybrid decomposition-ensemble model  
A remark on copy number variation detection methods 期刊论文
PLOS ONE, 2018, 卷号: 13, 期号: 4, 页码: 11
作者:  Li, Shuo;  Dou, Xialiang;  Gao, Ruiqi;  Ge, Xinzhou;  Qian, Minping;  Wan, Lin
收藏  |  浏览/下载：150/0  |  提交时间：2018/07/30