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Hierarchical graphical model reveals HFR1 bridging circadian rhythm and flower development in Arabidopsis thaliana 期刊论文
NPJ SYSTEMS BIOLOGY AND APPLICATIONS, 2019, 卷号: 5, 页码: 11
作者:  Duren, Zhana;  Wang, Yaling;  Wang, Jiguang;  Zhao, Xing-Ming;  Lv, Le;  Li, Xiaobo;  Liu, Jingdong;  Zhu, Xin-Guang;  Chen, Luonan;  Wang, Yong
收藏  |  浏览/下载：185/0  |  提交时间：2020/05/24
AP3: An Advanced Proteotypic Peptide Predictor for Targeted Proteomics by Incorporating Peptide Digestibility 期刊论文
ANALYTICAL CHEMISTRY, 2019, 卷号: 91, 期号: 13, 页码: 8705-8711
作者:  Gao, Zhiqiang;  Chang, Cheng;  Yang, Jinghan;  Zhu, Yunping;  Fu, Yan
收藏  |  浏览/下载：204/0  |  提交时间：2020/01/10
Simple tricks of convolutional neural network architectures improve DNA-protein binding prediction 期刊论文
BIOINFORMATICS, 2019, 卷号: 35, 期号: 11, 页码: 1837-1843
作者:  Cao, Zhen;  Zhang, Shihua
收藏  |  浏览/下载：193/0  |  提交时间：2020/01/10
The cis-trans binding strength defined by motif frequencies facilitates statistical inference of transcriptional regulation 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 11
作者:  Feng, Yance;  Zhang, Sheng;  Li, Liang;  Li, Lei M.
收藏  |  浏览/下载：159/0  |  提交时间：2019/10/28
BASE  Statistical inference  Transcriptional regulation  PUFA  DHA  EPA  Binding strength  
A powerful test for ordinal trait genetic association analysis 期刊论文
STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY, 2019, 卷号: 18, 期号: 2, 页码: 9
作者:  Xue, Yuan;  Wang, Jinjuan;  Ding, Juan;  Zhang, Sanguo;  Li, Qizhai
收藏  |  浏览/下载：163/0  |  提交时间：2020/01/10
ordinal response  power  proportional odds model  response selective sampling  
GenTree, an integrated resource for analyzing the evolution and function of primate-specific coding genes 期刊论文
GENOME RESEARCH, 2019, 卷号: 29, 期号: 4, 页码: 682-696
作者:  Shao, Yi;  Chen, Chunyan;  Shen, Hao;  He, Bin Z.;  Yu, Daqi;  Jiang, Shuai;  Zhao, Shilei;  Gao, Zhiqiang;  Zhu, Zhenglin;  Chen, Xi;  Fu, Yan;  Chen, Hua;  Gao, Ge;  Long, Manyuan;  Zhang, Yong E.
收藏  |  浏览/下载：210/0  |  提交时间：2020/01/10
PTMiner: Localization and Quality Control of Protein Modifications Detected in an Open Search and Its Application to Comprehensive Post-translational Modification Characterization in Human Proteome 期刊论文
MOLECULAR & CELLULAR PROTEOMICS, 2019, 卷号: 18, 期号: 2, 页码: 391-405
作者:  An, Zhiwu;  Zhai, Linhui;  Ying, Wantao;  Qian, Xiaohong;  Gong, Fuzhou;  Tan, Minjia;  Fu, Yan
收藏  |  浏览/下载：511/0  |  提交时间：2019/03/11
LFAQ: Toward Unbiased Label-Free Absolute Protein Quantification by Predicting Peptide Quantitative Factors 期刊论文
ANALYTICAL CHEMISTRY, 2019, 卷号: 91, 期号: 2, 页码: 1335-1343
作者:  Chang, Cheng;  Gao, Zhiqiang;  Ying, Wantao;  Fu, Yan;  Zhao, Yan;  Wu, Songfeng;  Li, Mengjie;  Wang, Guibin;  Qian, Xiaohong;  Zhu, Yunping;  He, Fuchu
收藏  |  浏览/下载：195/0  |  提交时间：2019/03/05
Brief Survey of Biological Network Alignment and a Variant with Incorporation of Functional Annotations 期刊论文
CURRENT BIOINFORMATICS, 2019, 卷号: 14, 期号: 1, 页码: 4-10
作者:  Jing, Fang;  Zhang, Shao-Wu;  Zhang, Shihua
收藏  |  浏览/下载：186/0  |  提交时间：2019/04/02
Biological network  network alignment  gene ontology  alignment graph  optimization