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Prediction of the transcription factor binding sites with meta-learning 期刊论文
METHODS, 2022, 卷号: 203, 页码: 207-213
作者:  Jing, Fang;  Zhang, Shao-Wu;  Zhang, Shihua
收藏  |  浏览/下载：182/0  |  提交时间：2023/02/07
Convolution neural network  Transcription factor binding sites  Meta learning  Noisy labels data  
Adversarial Information Bottleneck 期刊论文
IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 2022, 页码: 10
作者:  Zhai, Penglong;  Zhang, Shihua
收藏  |  浏览/下载：57/0  |  提交时间：2023/02/07
Robustness  Optimization  Mutual information  Deep learning  Perturbation methods  Training  Task analysis  Adversarial robustness  deep learning  hyperparameter selection  information bottleneck (IB)  
Annotating regulatory elements by heterogeneous network embedding 期刊论文
BIOINFORMATICS, 2022, 页码: 13
作者:  Lu, Yurun;  Feng, Zhanying;  Zhang, Songmao;  Wang, Yong
收藏  |  浏览/下载：141/0  |  提交时间：2022/06/21
MIMIC: an optimization method to identify cell type-specific marker panel for cell sorting 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2021, 卷号: 22, 期号: 6, 页码: 14
作者:  Zou, Meng;  Duren, Zhana;  Yuan, Qiuyue;  Li, Henry;  Hutchins, Andrew Paul;  Wong, Wing Hung;  Wang, Yong
收藏  |  浏览/下载：152/0  |  提交时间：2022/04/02
cell type-specific marker  TFs  surface markers  dimension reduction  hierarchical topology  
Robust model selection with covariables missing at random 期刊论文
ANNALS OF THE INSTITUTE OF STATISTICAL MATHEMATICS, 2021, 页码: 19
作者:  Liang, Zhongqi;  Wang, Qihua;  Wei, Yuting
收藏  |  浏览/下载：135/0  |  提交时间：2022/04/02
Model selection  Inverse probability weight  Model misspecification  Missing at random  Kullback-Leibler divergence  Robust  
Robust Bayesian matrix decomposition with mixture of Gaussian noise 期刊论文
NEUROCOMPUTING, 2021, 卷号: 449, 页码: 108-116
作者:  Wang, Haohui;  Zhang, Chihao;  Zhang, Shihua
收藏  |  浏览/下载：149/0  |  提交时间：2021/10/26
Bayesian method  Matrix decomposition  Maximum a posterior  Mixture of Gaussians  
Surrogate-variable-based model-free feature screening for survival data under the general censoring mechanism 期刊论文
ANNALS OF THE INSTITUTE OF STATISTICAL MATHEMATICS, 2021, 页码: 19
作者:  Zhang, Jing;  Wang, Qihua;  Wang, Xuan
收藏  |  浏览/下载：151/0  |  提交时间：2021/10/26
Feature screening  Model-free  Sure screening property  Survival data  Ultrahigh dimensionality  
Evaluating Performances and Importance of Venture Capitals: A Complex Network Approach 期刊论文
IEEE TRANSACTIONS ON CIRCUITS AND SYSTEMS I-REGULAR PAPERS, 2021, 卷号: 68, 期号: 5, 页码: 2060-2068
作者:  Liu, Jiaqi;  Li, Xuerong;  Lu, Linyuan;  Dong, Jichang;  Lu, Jinhu
收藏  |  浏览/下载：129/0  |  提交时间：2021/10/26
Venture capital  Investment  Complex networks  Companies  Industries  Technological innovation  Data models  Venture capital  co-investment network  investment performance  investment behavior  
Joint reconstruction of cis-regulatory interaction networks across multiple tissues using single-cell chromatin accessibility data 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2021, 卷号: 22, 期号: 3, 页码: 15
作者:  Dong, Kangning;  Zhang, Shihua
收藏  |  浏览/下载：117/0  |  提交时间：2022/04/02
cis-regulatory interaction networks  single-cell ATAC-seq  Gaussian graphical LASSO  
A beyond multiple robust approach for missing response problem 期刊论文
COMPUTATIONAL STATISTICS & DATA ANALYSIS, 2021, 卷号: 155, 页码: 13
作者:  Wang, Qihua;  Su, Miaomiao;  Wang, Ruoyu
收藏  |  浏览/下载：148/0  |  提交时间：2021/04/26
Model misspecification  Curse of dimension  Inverse probability weight  Imputation