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BiTSC2: Bayesian inference of tumor clonal tree by joint analysis of single-cell SNV and CNA data 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2022, 页码: 12
作者:  Chen, Ziwei;  Gong, Fuzhou;  Wan, Lin;  Ma, Liang
收藏  |  浏览/下载:191/0  |  提交时间:2022/06/21
single-cell DNA sequencing  intra-tumor heterogeneity  single nucleotide variation  copy number alteration  Bayesian modeling  cancer evolution  
The cis-trans binding strength defined by motif frequencies facilitates statistical inference of transcriptional regulation 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 11
作者:  Feng, Yance;  Zhang, Sheng;  Li, Liang;  Li, Lei M.
收藏  |  浏览/下载:159/0  |  提交时间:2019/10/28
BASE  Statistical inference  Transcriptional regulation  PUFA  DHA  EPA  Binding strength  
A remark on copy number variation detection methods 期刊论文
PLOS ONE, 2018, 卷号: 13, 期号: 4, 页码: 11
作者:  Li, Shuo;  Dou, Xialiang;  Gao, Ruiqi;  Ge, Xinzhou;  Qian, Minping;  Wan, Lin
收藏  |  浏览/下载:151/0  |  提交时间:2018/07/30
Estimating Phred scores of Illumina base calls by logistic regression and sparse modeling 期刊论文
BMC BIOINFORMATICS, 2017, 卷号: 18, 页码: 14
作者:  Zhang, Sheng;  Wang, Bo;  Wan, Lin;  Li, Lei M.
收藏  |  浏览/下载:152/0  |  提交时间:2018/07/30
Base-calling  Logistic regression  Quality score  L-1 regularization  AIC  BIC  Empirical discrimination power  
HapEdit: an accuracy assessment viewer for haplotype assembly using massively parallel DNA-sequencing technologies 期刊论文
NUCLEIC ACIDS RESEARCH, 2011, 卷号: 39, 页码: W557-W561
作者:  Kim, Jong Hyun;  Kim, Woo-Cheol;  Li, Lei M.;  Park, Sanghyun
收藏  |  浏览/下载:88/0  |  提交时间:2018/07/30
Common Genetic Variants and Risk for HPV Persistence and Progression to Cervical Cancer 期刊论文
PLOS ONE, 2010, 卷号: 5, 期号: 1, 页码: 7
作者:  Wang, Sophia S.;  Gonzalez, Paula;  Yu, Kai;  Porras, Carolina;  Li, Qizhai;  Safaeian, Mahboobeh;  Cecilia Rodriguez, Ana;  Sherman, Mark E.;  Bratti, Concepcion;  Schiffman, Mark;  Wacholder, Sholom;  Burk, Robert D.;  Herrero, Rolando;  Chanock, Stephen J.;  Hildesheim, Allan
收藏  |  浏览/下载:123/0  |  提交时间:2018/07/30
Optimal two-stage design for case-control association analysis incorporating genotyping errors 期刊论文
ANNALS OF HUMAN GENETICS, 2008, 卷号: 72, 页码: 375-387
作者:  Zuo, Y.;  Zou, G.;  Wang, J.;  Zhao, H.;  Liang, H.
收藏  |  浏览/下载:107/0  |  提交时间:2018/07/30
DNA pooling  genotyping errors  individual genotyping  measurement errors  power  two-stage design  
describingdnasequencesby2dimensionalwalks 期刊论文
应用泛函分析学报, 2004, 卷号: 006, 期号: 001, 页码: 1
作者:  Li Banghe
收藏  |  浏览/下载:93/0  |  提交时间:2020/01/10