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中国科学院数学与系统科学研究院机构知识库
KMS Of Academy of mathematics and systems sciences, CAS
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BiTSC2: Bayesian inference of tumor clonal tree by joint analysis of single-cell SNV and CNA data
期刊论文
BRIEFINGS IN BIOINFORMATICS, 2022, 页码: 12
Authors:
Chen, Ziwei
;
Gong, Fuzhou
;
Wan, Lin
;
Ma, Liang
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View/Download:94/0
  |  
Submit date:2022/06/21
single-cell DNA sequencing
intra-tumor heterogeneity
single nucleotide variation
copy number alteration
Bayesian modeling
cancer evolution
Compressed Coding, AMP-Based Decoding, and Analog Spatial Coupling
期刊论文
IEEE TRANSACTIONS ON COMMUNICATIONS, 2020, 卷号: 68, 期号: 12, 页码: 7362-7375
Authors:
Liang, Shansuo
;
Liang, Chulong
;
Ma, Junjie
;
Ping, Li
Favorite
  |  
View/Download:176/0
  |  
Submit date:2021/04/26
Decoding
Error correction
Encoding
Error correction codes
Signal to noise ratio
Modulation
Compressed sensing
Compressed sensing
forward error control coding
approximate message passing
state evolution
area theorem and analog spatial-coupling
A Self-test Prediction Model to Determine the Probability Risk of Non-alcoholic Fatty Liver Disease
期刊论文
BIOMEDICAL AND ENVIRONMENTAL SCIENCES, 2020, 卷号: 33, 期号: 11, 页码: 857-861
Authors:
Li Qiang
;
Shen Qun Lun
;
Xu Chao Nan
;
Li Ming Liang
;
Ma Zhi Min
;
Zhang Shan
;
Chen Shuo
;
Zhang Min Ying
;
Zhang Jing Bo
;
Liu Feng
;
Yang Xing Hua
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  |  
View/Download:110/0
  |  
Submit date:2021/04/26
NeuralEE: A GPU-Accelerated Elastic Embedding Dimensionality Reduction Method for Visualizing Large-Scale scRNA-Seq Data
期刊论文
FRONTIERS IN GENETICS, 2020, 卷号: 11, 页码: 8
Authors:
Xiong, Jiankang
;
Gong, Fuzhou
;
Wan, Lin
;
Ma, Liang
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View/Download:125/0
  |  
Submit date:2021/01/14
single-cell RNA sequencing
elastic embedding
neural networks
large-scale
stochastic optimization
parametric models
generalizable models
Epidemiology characteristics of the clonal complexes of Mycobacterium tuberculosis Lineage 4 in China
期刊论文
INFECTION GENETICS AND EVOLUTION, 2020, 卷号: 84, 页码: 7
Authors:
Ni, Xumin
;
Zhu, Chendi
;
Li, Qing
;
Jiang, Hui
;
Liu, Jingyi
;
Chen, Zhi
;
He, Li
;
Jia, Junnan
;
Zhang, Zongde
;
Ma, Liang
;
Li, Weimin
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  |  
View/Download:108/0
  |  
Submit date:2021/01/14
Mycobacterium tuberculosis
Lineage 4
Clonal complexes
Geographical distribution
Epidemiology characteristics
RobustClone: a robust PCA method for tumor clone and evolution inference from single-cell sequencing data
期刊论文
BIOINFORMATICS, 2020, 卷号: 36, 期号: 11, 页码: 3299-3306
Authors:
Chen, Ziwei
;
Gong, Fuzhou
;
Wan, Lin
;
Ma, Liang
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View/Download:146/0
  |  
Submit date:2020/09/23
A Branch Point on Differentiation Trajectory is the Bifurcating Event Revealed by Dynamical Network Biomarker Analysis of Single-Cell Data
期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 2, 页码: 366-375
Authors:
Chen, Ziwei
;
Bai, Xiangqi
;
Ma, Liang
;
Wang, Xiawei
;
Liu, Xiuqin
;
Liu, Yuting
;
Chen, Luonan
;
Wan, Lin
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  |  
View/Download:142/0
  |  
Submit date:2020/05/24
Trajectory
Heuristic algorithms
Mice
Correlation
Reactive power
Pseudo temporal trajectory
branch point
DNB theory
reconstruction
single-cell data
bifurcation
dynamical system
双极器件LPNP辐照损伤效应的并行有限元数值模拟
期刊论文
系统仿真学报, 2020, 卷号: 32, 期号: 12, 页码: 2376-2382
Authors:
王芹
;
马召灿
;
李鸿亮
;
张林波
;
卢本卓
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View/Download:136/0
  |  
Submit date:2021/04/26
Zlamal finite element
radiation damage effects
LPNP BJT
parallel simulation
Zlamal有限元
辐照损伤效应
LPNP晶体管
并行数值模拟
Statistical test of structured continuous trees based on discordance matrix
期刊论文
BIOINFORMATICS, 2019, 卷号: 35, 期号: 23, 页码: 4962-4970
Authors:
Bai, Xiangqi
;
Ma, Liang
;
Wan, Lin
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View/Download:103/0
  |  
Submit date:2020/05/24
Multi-scale analysis of schizophrenia risk genes, brain structure, and clinical symptoms reveals integrative clues for subtyping schizophrenia patients
期刊论文
JOURNAL OF MOLECULAR CELL BIOLOGY, 2019, 卷号: 11, 期号: 8, 页码: 678-687
Authors:
Ma, Liang
;
Rolls, Edmund T.
;
Liu, Xiuqin
;
Liu, Yuting
;
Jiao, Zeyu
;
Wang, Yue
;
Gong, Weikang
;
Ma, Zhiming
;
Gong, Fuzhou
;
Wan, Lin
Favorite
  |  
View/Download:166/0
  |  
Submit date:2020/05/24
Schizophrenia
PANSS
multi-scale analysis
hot cluster
grey matter volume
pathway