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Inferring transcriptional interactions and regulator activities from experimental data 期刊论文
MOLECULES AND CELLS, 2007, 卷号: 24, 期号: 3, 页码: 307-315
作者:  Wang, Rui-Sheng;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：142/0  |  提交时间：2018/07/30
combinatorial regulation  regulator activity  transcription factor  transcriptional interactions  
Predicting gene ontology functions from protein's regional surface structures 期刊论文
BMC BIOINFORMATICS, 2007, 卷号: 8, 页码: 13
作者:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Chen, Luonan;  Zhang, Xiang-Sun
收藏  |  浏览/下载：170/0  |  提交时间：2018/07/30
A trust region method for optimization problem with singular solutions 期刊论文
APPLIED MATHEMATICS AND OPTIMIZATION, 2007, 卷号: 56, 期号: 3, 页码: 379-394
作者:  Zhang, Juliang;  Wu, Liangyun;  Zhang, Xiangsun
收藏  |  浏览/下载：114/0  |  提交时间：2018/07/30
nonlinear convex optimization  trust region method  local error bound  superlinear convergence  nonsingularity  
Hubs with Network Motifs Organize Modularity Dynamically in the Protein-Protein Interaction Network of Yeast 期刊论文
PLOS ONE, 2007, 卷号: 2, 期号: 11, 页码: 9
作者:  Jin, Guangxu;  Zhang, Shihua;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：127/0  |  提交时间：2018/07/30
Inferring transcriptional regulatory networks from high-throughput data 期刊论文
BIOINFORMATICS, 2007, 卷号: 23, 期号: 22, 页码: 3056-3064
作者:  Wang, Rui-Sheng;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：132/0  |  提交时间：2018/07/30
Analysis on multi-domain cooperation for predicting protein-protein interactions 期刊论文
BMC BIOINFORMATICS, 2007, 卷号: 8, 页码: 20
作者:  Wang, Rui-Sheng;  Wang, Yong;  Wu, Ling-Yun;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：147/0  |  提交时间：2018/07/30
An optimization approach to the reconstruction of positional DNA sequencing by hybridization with errors 期刊论文
EUROPEAN JOURNAL OF OPERATIONAL RESEARCH, 2007, 卷号: 182, 期号: 1, 页码: 413-427
作者:  Zhang, Ji-Hong;  Wu, Ling-Yun;  Zhao, Yu-Ying;  Zhang, Xiang-Sun
收藏  |  浏览/下载：115/0  |  提交时间：2018/07/30
positional sequencing by hybridization  reconstruction of DNA fragment  positive errors and negative errors  dynamic programming  branch and bound algorithm  
Uncovering fuzzy community structure in complex networks 期刊论文
PHYSICAL REVIEW E, 2007, 卷号: 76, 期号: 4, 页码: 7
作者:  Zhang, Shihua;  Wang, Rui-Sheng;  Zhang, Xiang-Sun
收藏  |  浏览/下载：136/0  |  提交时间：2018/07/30
Discovering functions and revealing mechanisms at molecular level from biological networks 期刊论文
PROTEOMICS, 2007, 卷号: 7, 期号: 16, 页码: 2856-2869
作者:  Zhang, Shihua;  Jin, Guangxu;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：136/0  |  提交时间：2018/07/30
biological network  network analysis  network comparison  network integration  protein interaction network  
Alignment of molecular networks by integer quadratic programming 期刊论文
BIOINFORMATICS, 2007, 卷号: 23, 期号: 13, 页码: 1631-1639
作者:  Zhenping, Li;  Zhang, Shihua;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：140/0  |  提交时间：2018/07/30