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An efficient network querying method based on conditional random fields 期刊论文
BIOINFORMATICS, 2011, 卷号: 27, 期号: 22, 页码: 3173-3178
Authors:  Huang, Qiang;  Wu, Ling-Yun;  Zhang, Xiang-Sun
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Prediction of protein-RNA binding sites by a random forest method with combined features 期刊论文
BIOINFORMATICS, 2010, 卷号: 26, 期号: 13, 页码: 1616-1622
Authors:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
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Detecting disease associated modules and prioritizing active genes based on high throughput data 期刊论文
BMC BIOINFORMATICS, 2010, 卷号: 11, 页码: 12
Authors:  Qiu, Yu-Qing;  Zhang, Shihua;  Zhang, Xiang-Sun;  Chen, Luonan
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Evaluating Protein Similarity from Coarse Structures 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2009, 卷号: 6, 期号: 4, 页码: 583-593
Authors:  Wang, Yong;  Wu, Ling-Yun;  Zhang, Ji-Hong;  Zhan, Zhong-Wei;  Zhang, Xiang-Sun;  Chen, Luonan
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Protein structure  structure comparison  protein surface  
Exploring the constrained maximum edge-weight connected graph problem 期刊论文
ACTA MATHEMATICAE APPLICATAE SINICA-ENGLISH SERIES, 2009, 卷号: 25, 期号: 4, 页码: 697-708
Authors:  Li, Zhen-ping;  Zhang, Shi-hua;  Zhang, Xiang-Sun;  Chen, Luo-nan
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connected subgraph  integer linear programming model  network flow  constraint Steiner network  maximum edge weight, heuristic algorithm  
Predicting eukaryotic transcriptional cooperativity by Bayesian network integration of genome-wide data 期刊论文
NUCLEIC ACIDS RESEARCH, 2009, 卷号: 37, 期号: 18, 页码: 5943-5958
Authors:  Wang, Yong;  Zhang, Xiang-Sun;  Xia, Yu
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Self-organizing map approaches for the haplotype assembly problem 期刊论文
MATHEMATICS AND COMPUTERS IN SIMULATION, 2009, 卷号: 79, 期号: 10, 页码: 3026-3037
Authors:  Wu, Ling-Yun;  Li, Zhenping;  Wang, Rui-Sheng;  Zhang, Xiang-Sun;  Chen, Luonan
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SNP  Haplotype assembly  Minimum error correction  Self-organizing maps  Neural network