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Associating lncRNAs with small molecules via bilevel optimization reveals cancer-related lncRNAs 期刊论文
PLOS COMPUTATIONAL BIOLOGY, 2019, 卷号: 15, 期号: 12, 页码: 20
作者:  Wang, Yongcui;  Chen, Shilong;  Chen, Luonan;  Wang, Yong
收藏  |  浏览/下载：191/0  |  提交时间：2020/05/24
Joint feature screening for ultra-high-dimensional sparse additive hazards model by the sparsity-restricted pseudo-score estimator 期刊论文
ANNALS OF THE INSTITUTE OF STATISTICAL MATHEMATICS, 2019, 卷号: 71, 期号: 5, 页码: 1007-1031
作者:  Chen, Xiaolin;  Liu, Yi;  Wang, Qihua
收藏  |  浏览/下载：218/0  |  提交时间：2020/01/10
Additive hazards model  Joint feature screening  Iterative hard-thresholding algorithm  Sure screening property  
SUFFICIENT DIMENSION REDUCTION UNDER DIMENSION-REDUCTION-BASED IMPUTATION WITH PREDICTORS MISSING AT RANDOM 期刊论文
STATISTICA SINICA, 2019, 卷号: 29, 期号: 4, 页码: 1751-1778
作者:  Yang, Xiaojie;  Wang, Qihua
收藏  |  浏览/下载：267/0  |  提交时间：2020/01/10
Kernel imputation  missing at random  missing predictors  sliced inverse regression  sufficient dimension reduction  
Circular Trajectory Reconstruction Uncovers Cell-Cycle Progression and Regulatory Dynamics from Single-Cell Hi-C Maps 期刊论文
ADVANCED SCIENCE, 2019, 页码: 13
作者:  Ye, Yusen;  Gao, Lin;  Zhang, Shihua
收藏  |  浏览/下载：303/0  |  提交时间：2020/01/10
cell cycle  chromosomal architectures  circular trajectory  dynamic structures  single-cell Hi-C maps  
Hierarchical graphical model reveals HFR1 bridging circadian rhythm and flower development in Arabidopsis thaliana 期刊论文
NPJ SYSTEMS BIOLOGY AND APPLICATIONS, 2019, 卷号: 5, 页码: 11
作者:  Duren, Zhana;  Wang, Yaling;  Wang, Jiguang;  Zhao, Xing-Ming;  Lv, Le;  Li, Xiaobo;  Liu, Jingdong;  Zhu, Xin-Guang;  Chen, Luonan;  Wang, Yong
收藏  |  浏览/下载：187/0  |  提交时间：2020/05/24
Learning common and specific patterns from data of multiple interrelated biological scenarios with matrix factorization 期刊论文
NUCLEIC ACIDS RESEARCH, 2019, 卷号: 47, 期号: 13, 页码: 6606-6617
作者:  Zhang, Lihua;  Zhang, Shihua
收藏  |  浏览/下载：200/0  |  提交时间：2020/01/10
MSTD: an efficient method for detecting multi-scale topological domains from symmetric and asymmetric 3D genomic maps 期刊论文
NUCLEIC ACIDS RESEARCH, 2019, 卷号: 47, 期号: 11, 页码: 11
作者:  Ye, Yusen;  Gao, Lin;  Zhang, Shihua
收藏  |  浏览/下载：165/0  |  提交时间：2020/01/10
Simple tricks of convolutional neural network architectures improve DNA-protein binding prediction 期刊论文
BIOINFORMATICS, 2019, 卷号: 35, 期号: 11, 页码: 1837-1843
作者:  Cao, Zhen;  Zhang, Shihua
收藏  |  浏览/下载：194/0  |  提交时间：2020/01/10
Systems biology intertwines with single cell and AI 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 3
作者:  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：204/0  |  提交时间：2019/10/28
Systems biology  Network  Data integration  
Simultaneous variable selection and class fusion with penalized distance criterion based classifiers 期刊论文
COMPUTATIONAL STATISTICS & DATA ANALYSIS, 2019, 卷号: 133, 页码: 138-152
作者:  Sheng, Ying;  Wang, Qihua
收藏  |  浏览/下载：143/0  |  提交时间：2019/12/13
Linear discriminant analysis  Discriminant directions  Variable selection  Class fusion  Misclassification error rate