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Network-Regularized Sparse Logistic Regression Models for Clinical Risk Prediction and Biomarker Discovery 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2018, 卷号: 15, 期号: 3, 页码: 944-953
作者:  Min, Wenwen;  Liu, Juan;  Zhang, Shihua
收藏  |  浏览/下载:250/0  |  提交时间:2018/07/30
Sparse logistic regression  network-regularized penalty  survival risk prediction  feature selection  
Integrative analysis for identifying joint modular patterns of gene-expression and drug-response data 期刊论文
BIOINFORMATICS, 2016, 卷号: 32, 期号: 11, 页码: 1724-1732
作者:  Chen, Jinyu;  Zhang, Shihua
收藏  |  浏览/下载:141/0  |  提交时间:2018/07/30
A Two-Stage Method to Identify Joint Modules From Matched MicroRNA and mRNA Expression Data 期刊论文
IEEE TRANSACTIONS ON NANOBIOSCIENCE, 2016, 卷号: 15, 期号: 4, 页码: 362-370
作者:  Min, Wenwen;  Liu, Juan;  Luo, Fei;  Zhang, Shihua
收藏  |  浏览/下载:171/0  |  提交时间:2018/07/30
L-0-penalized singular value decomposition (L-0-SVD)  miRNA cluster  miRNA-gene joint module  multiple-output sparse group lasso  
Infer Metagenomic Abundance and Reveal Homologous Genomes Based on the Structure of Taxonomy Tree 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2015, 卷号: 12, 期号: 5, 页码: 1112-1122
作者:  Qiu, Yu-Qing;  Tian, Xue;  Zhang, Shihua
收藏  |  浏览/下载:145/0  |  提交时间:2018/07/30
Metagenomics  abundance estimation  taxonomy tree  expectation-maximization algorithm  
Over-expression of EPS15 is a favorable prognostic factor in breast cancer 期刊论文
MOLECULAR BIOSYSTEMS, 2015, 卷号: 11, 期号: 11, 页码: 2978-2985
作者:  Dai, Xiaofeng;  Liu, Zhaoqi;  Zhang, Shihua
收藏  |  浏览/下载:124/0  |  提交时间:2018/07/30