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MIMIC: an optimization method to identify cell type-specific marker panel for cell sorting 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2021, 卷号: 22, 期号: 6, 页码: 14
作者:  Zou, Meng;  Duren, Zhana;  Yuan, Qiuyue;  Li, Henry;  Hutchins, Andrew Paul;  Wong, Wing Hung;  Wang, Yong
收藏  |  浏览/下载：146/0  |  提交时间：2022/04/02
cell type-specific marker  TFs  surface markers  dimension reduction  hierarchical topology  
Revealing transcription factor and histone modification co-localization and dynamics across cell lines by integrating ChIP-seq and RNA-seq data 期刊论文
BMC GENOMICS, 2018, 卷号: 19, 页码: 16
作者:  Zhang, Lirong;  Xue, Gaogao;  Liu, Junjie;  Li, Qianzhong;  Wang, Yong
收藏  |  浏览/下载：273/0  |  提交时间：2019/01/11
Transcription factor  Histone modification  Co-localization  Dynamics  
Identifying joint biomarker panel from multiple level dataset by an optimization model 期刊论文
BIOMARKERS IN MEDICINE, 2016, 卷号: 10, 期号: 6, 页码: 567-575
作者:  Zou, Meng;  Zhang, Peng-Jun;  Chen, Luonan;  Tian, Ya-Ping;  Wang, Yong
收藏  |  浏览/下载：141/0  |  提交时间：2018/07/30
group lasso optimization  joint biomarker panel  multiple level dataset  
A novel mixed integer programming for multi-biomarker panel identification by distinguishing malignant from benign colorectal tumors 期刊论文
METHODS, 2015, 卷号: 83, 页码: 3-17
作者:  Zou, Meng;  Zhang, Peng-Jun;  Wen, Xin-Yu;  Chen, Luonan;  Tian, Ya-Ping;  Wang, Yong
收藏  |  浏览/下载：140/0  |  提交时间：2018/07/30
Translational bioinformatics  Multi-biomarker  Colorectal cancer  Mixed integer programming  
Prediction of protein-RNA binding sites by a random forest method with combined features 期刊论文
BIOINFORMATICS, 2010, 卷号: 26, 期号: 13, 页码: 1616-1622
作者:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：144/0  |  提交时间：2018/07/30
Identifying translation initiation sites in prokaryotes using support vector machine 期刊论文
JOURNAL OF THEORETICAL BIOLOGY, 2010, 卷号: 262, 期号: 4, 页码: 644-649
作者:  Gao, Tingting;  Yang, Zhixia;  Wang, Yong;  Jing, Ling
收藏  |  浏览/下载：126/0  |  提交时间：2018/07/30
Translation initiation site prediction  Support vector machine  Position specific weight matrix  
Predicting gene ontology functions from protein's regional surface structures 期刊论文
BMC BIOINFORMATICS, 2007, 卷号: 8, 页码: 13
作者:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Chen, Luonan;  Zhang, Xiang-Sun
收藏  |  浏览/下载：160/0  |  提交时间：2018/07/30
Analysis on multi-domain cooperation for predicting protein-protein interactions 期刊论文
BMC BIOINFORMATICS, 2007, 卷号: 8, 页码: 20
作者:  Wang, Rui-Sheng;  Wang, Yong;  Wu, Ling-Yun;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：141/0  |  提交时间：2018/07/30