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A Model-Embedded Trend Test with Incorporating Hardy-Weinberg Equilibrium Information
Hu Xiaonan1,2; Duan Xiaogang3; Pan Dongdong4; Zhang Sanguo1,2; Li Qizhai5
2017-02-01
Source PublicationJOURNAL OF SYSTEMS SCIENCE & COMPLEXITY
ISSN1009-6124
Volume30Issue:1Pages:101-110
AbstractThe genetic models are greatly important in the analysis of genetic epidemiologic studies and many of the studies are conducted using the trend test under the additive model. However, for many complex diseases and traits, the underlying genetic model for a genetic locus is usually uncertain. So a robust test free of genetic model is appropriate. In this paper, the authors propose a model-embedded trend test by incorporating Hardy-Weinberg equilibrium information and obtain the explicit formula to calculate its statistical significance. Extensive simulation studies show the proposed test is more robust than the existing procedures. Finally, a real application is further analyzed to show the performance of the proposed test.
KeywordGenetic model hardy-weinberg equilibrium power robust trend test
DOI10.1007/s11424-017-6187-4
Language英语
Funding ProjectSpecial National Key Research and Development Plan[2016YFD0400206] ; Breakthrough Project of Strategic Priority Program of Chinese Academy of Sciences[XDB13040600] ; Youth Innovation Promotion Association of Chinese Academy of Sciences ; National Science Foundation of China[11371353] ; National Science Foundation of China[11661080] ; National Science Foundation of China[61134013] ; Special Fund of the University of Chinese Academy of Sciences for Scientific Research Cooperation
WOS Research AreaMathematics
WOS SubjectMathematics, Interdisciplinary Applications
WOS IDWOS:000397236700008
PublisherSPRINGER HEIDELBERG
Citation statistics
Document Type期刊论文
Identifierhttp://ir.amss.ac.cn/handle/2S8OKBNM/25114
Collection系统科学研究所
Corresponding AuthorPan Dongdong
Affiliation1.Univ Chinese Acad Sci, Sch Math Sci, Beijing 100049, Peoples R China
2.Chinese Acad Sci, Key Lab Big Data Min & Knowledge Management, Beijing 100190, Peoples R China
3.Beijing Normal Univ, Sch Stat, Beijing 100875, Peoples R China
4.Yunnan Univ, Dept Stat, Kunming 650091, Peoples R China
5.Chinese Acad Sci, Acad Math & Syst Sci, Key Lab Syst & Control, Beijing 100190, Peoples R China
Recommended Citation
GB/T 7714
Hu Xiaonan,Duan Xiaogang,Pan Dongdong,et al. A Model-Embedded Trend Test with Incorporating Hardy-Weinberg Equilibrium Information[J]. JOURNAL OF SYSTEMS SCIENCE & COMPLEXITY,2017,30(1):101-110.
APA Hu Xiaonan,Duan Xiaogang,Pan Dongdong,Zhang Sanguo,&Li Qizhai.(2017).A Model-Embedded Trend Test with Incorporating Hardy-Weinberg Equilibrium Information.JOURNAL OF SYSTEMS SCIENCE & COMPLEXITY,30(1),101-110.
MLA Hu Xiaonan,et al."A Model-Embedded Trend Test with Incorporating Hardy-Weinberg Equilibrium Information".JOURNAL OF SYSTEMS SCIENCE & COMPLEXITY 30.1(2017):101-110.
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