Protein domain annotation with predicted domain-domain interaction networks

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	Protein domain annotation with predicted domain-domain interaction networks
	Zhao, Xing-Ming 1,2,3; Wang, Yong4 ; Chen, Luonan 1,2,5,6; Aihara, Kazuyuki 1,2
	2008-06-01
发表期刊	PROTEIN AND PEPTIDE LETTERS
ISSN	0929-8665
卷号	15 期号:5 页码:456-462
摘要	This paper presents a framework for annotating protein domains with predicted domain-domain interaction networks. Specially, domain annotation is formalized as a multi-class classification problem in this work. The numerical experiments on InterPro domains show promising results, which proves the efficiency of our proposed methods.
关键词	predicted domain-domain interaction domain annotation majority rule diffusion kernel shortest path
语种	英语
WOS研究方向	Biochemistry & Molecular Biology
WOS类目	Biochemistry & Molecular Biology
WOS记录号	WOS:000257467200006
出版者	BENTHAM SCIENCE PUBL LTD
引用统计
文献类型	期刊论文
条目标识符	http://ir.amss.ac.cn/handle/2S8OKBNM/6956
专题	应用数学研究所
通讯作者	Aihara, Kazuyuki
作者单位	1.Univ Tokyo, Inst Ind Sci, Meguro Ku, Tokyo 1538505, Japan 2.JST, ERATO Aihara Complex Modelling Project, Tokyo 1510064, Japan 3.CAS, Hefei Inst Intelligent Machines, Intelligent Comp Lab, Anhui 230031, Peoples R China 4.CAS, Acad Math & Syst Sci, Beijing 100080, Peoples R China 5.Osaka Sangyo Univ, Dept Elect Engn & Elect, Osaka, Japan 6.Shanghai Univ, Inst Syst Biol, Shanghai 200444, Peoples R China
推荐引用方式 GB/T 7714	Zhao, Xing-Ming,Wang, Yong,Chen, Luonan,et al. Protein domain annotation with predicted domain-domain interaction networks[J]. PROTEIN AND PEPTIDE LETTERS,2008,15(5):456-462.
APA	Zhao, Xing-Ming,Wang, Yong,Chen, Luonan,&Aihara, Kazuyuki.(2008).Protein domain annotation with predicted domain-domain interaction networks.PROTEIN AND PEPTIDE LETTERS,15(5),456-462.
MLA	Zhao, Xing-Ming,et al."Protein domain annotation with predicted domain-domain interaction networks".PROTEIN AND PEPTIDE LETTERS 15.5(2008):456-462.