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hReg-CNCC reconstructs a regulatory network in human cranial neural crest cells and annotates variants in a developmental context 期刊论文
COMMUNICATIONS BIOLOGY, 2021, 卷号: 4, 期号: 1, 页码: 16
Authors:  Feng, Zhanying;  Duren, Zhana;  Xiong, Ziyi;  Wang, Sijia;  Liu, Fan;  Wong, Wing Hung;  Wang, Yong
Favorite  |  View/Download:30/0  |  Submit date:2021/06/01
Imputing single-cell RNA-seq data by considering cell heterogeneity and prior expression of dropouts 期刊论文
JOURNAL OF MOLECULAR CELL BIOLOGY, 2021, 卷号: 13, 期号: 1, 页码: 29-40
Authors:  Zhang, Lihua;  Zhang, Shihua
Favorite  |  View/Download:10/0  |  Submit date:2021/10/26
single-cell RNA-seq  dropout  imputation  low-rank  systems biology  
AdmixSim: A Forward-Time Simulator for Various Complex Scenarios of Population Admixture 期刊论文
FRONTIERS IN GENETICS, 2020, 卷号: 11, 页码: 5
Authors:  Yang, Xiong;  Yuan, Kai;  Ni, Xumin;  Zhou, Ying;  Guo, Wei;  Xu, Shuhua
Favorite  |  View/Download:15/0  |  Submit date:2021/04/26
simulation  population admixture  genetic ancestry  Wright Fisher model  admixture model  
Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation 期刊论文
NATURE COMMUNICATIONS, 2020, 卷号: 11, 期号: 1, 页码: 20
Authors:  Xin, Jingxue;  Zhang, Hui;  He, Yaoxi;  Duren, Zhana;  Bai, Caijuan;  Chen, Lang;  Luo, Xin;  Yan, Dong-Sheng;  Zhang, Chaoyu;  Zhu, Xiang;  Yuan, Qiuyue;  Feng, Zhanying;  Cui, Chaoying;  Qi, Xuebin;  Ouzhuluobu;  Wong, Wing Hung;  Wang, Yong;  Su, Bing
Favorite  |  View/Download:19/0  |  Submit date:2021/01/14
3Scover: Identifying Safeguard TF from Cell Type-TF Specificity Network by an Extended Minimum Set Cover Model 期刊论文
ISCIENCE, 2020, 卷号: 23, 期号: 6, 页码: 31
Authors:  Yuan, Qiuyue;  Wang, Yong
Favorite  |  View/Download:40/0  |  Submit date:2020/09/23
MultiWaver 2.0: modeling discrete and continuous gene flow to reconstruct complex population admixtures 期刊论文
EUROPEAN JOURNAL OF HUMAN GENETICS, 2019, 卷号: 27, 期号: 1, 页码: 133-139
Authors:  Ni, Xumin;  Yuan, Kai;  Liu, Chang;  Feng, Qidi;  Tian, Lei;  Ma, Zhiming;  Xu, Shuhua
Favorite  |  View/Download:103/0  |  Submit date:2019/03/05