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Time course regulatory analysis based on paired expression and chromatin accessibility data 期刊论文
GENOME RESEARCH, 2020, 卷号: 30, 期号: 4, 页码: 622-634
Authors:  Duren, Zhana;  Chen, Xi;  Xin, Jingxue;  Wang, Yong;  Wong, Wing Hung
Favorite  |  View/Download:2/0  |  Submit date:2020/06/30
A joint modeling approach for analyzing marker data in the presence of a terminal event 期刊论文
BIOMETRICS, 2020, 页码: 12
Authors:  Zhou, Jie;  Chen, Xin;  Song, Xinyuan;  Sun, Liuquan
Favorite  |  View/Download:3/0  |  Submit date:2020/05/24
joint modeling  longitudinal data analysis  marker process  medical costs  recurrent events  terminal event  
zokordbtissuespecificregulatorynetworkannotationfornoncodingelementsofplateauzokor 期刊论文
quantitativebiology, 2020, 卷号: 8, 期号: 1, 页码: 43-50
Authors:  Xin Jingxue;  Hao Junjun;  Chen Lang;  Zhang Tao;  Li Lei;  Chen Luonan;  Zhao Wenmin;  Lu Xuemei;  Shi Peng;  Wang Yong
Favorite  |  View/Download:4/0  |  Submit date:2020/06/30
tissue specific regulatory network  non-coding element  plateau zokor  non-model species  
Hierarchical graphical model reveals HFR1 bridging circadian rhythm and flower development in Arabidopsis thaliana 期刊论文
NPJ SYSTEMS BIOLOGY AND APPLICATIONS, 2019, 卷号: 5, 页码: 11
Authors:  Duren, Zhana;  Wang, Yaling;  Wang, Jiguang;  Zhao, Xing-Ming;  Lv, Le;  Li, Xiaobo;  Liu, Jingdong;  Zhu, Xin-Guang;  Chen, Luonan;  Wang, Yong
Favorite  |  View/Download:3/0  |  Submit date:2020/05/24
TFAP2C-and p63-Dependent Networks Sequentially Rearrange Chromatin Landscapes to Drive Human Epidermal Lineage Commitment 期刊论文
CELL STEM CELL, 2019, 卷号: 24, 期号: 2, 页码: 271-+
Authors:  Li, Lingjie;  Wang, Yong;  Torkelson, Jessica L.;  Shankar, Gautam;  Pattison, Jillian M.;  Zhen, Hanson H.;  Fang, Fengqin;  Duren, Zhana;  Xin, Jingxue;  Gaddam, Sadhana;  Melo, Sandra P.;  Piekos, Samantha N.;  Li, Jiang;  Liaw, Eric J.;  Chen, Lang;  Li, Rui;  Wernig, Marius;  Wong, Wing H.;  Chang, Howard Y.;  Oro, Anthony E.
Favorite  |  View/Download:24/0  |  Submit date:2019/03/11
Extended ADMM and BCD for nonseparable convex minimization models with quadratic coupling terms: convergence analysis and insights 期刊论文
MATHEMATICAL PROGRAMMING, 2019, 卷号: 173, 期号: 1-2, 页码: 37-77
Authors:  Chen, Caihua;  Li, Min;  Liu, Xin;  Ye, Yinyu
Favorite  |  View/Download:12/0  |  Submit date:2019/03/11
Nonseparable convex minimization  Alternating direction method of multipliers  Block coordinate descent method  Iterate convergence  Random permutation  
A Semisupervised Classification Approach for Multidomain Networks With Domain Selection 期刊论文
IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 2019, 卷号: 30, 期号: 1, 页码: 269-283
Authors:  Chen, Chuan;  Xin, Jingxue;  Wang, Yong;  Chen, Luonan;  Ng, Michael K.
Favorite  |  View/Download:17/0  |  Submit date:2019/03/05
Domain selection  multidomain classification  network integration  semisupervised learning  sparsity  
A semiparametric additive rate model for a modulated renewal process 期刊论文
LIFETIME DATA ANALYSIS, 2018, 卷号: 24, 期号: 4, 页码: 675-698
Authors:  Chen, Xin;  Ding, Jieli;  Sun, Liuquan
Favorite  |  View/Download:13/0  |  Submit date:2019/03/05
Additive rate model  Block bootstrap  Estimating equation  Mixing condition  Modulated renewal process  Recurrent event data  
Interactive Multiobjective Optimization: A Review of the State-of-the-Art 期刊论文
IEEE ACCESS, 2018, 卷号: 6, 页码: 41256-41279
Authors:  Xin, Bin;  Chen, Lu;  Chen, Jie;  Ishibuchi, Hisao;  Hirota, Kaoru;  Liu, Bo
Favorite  |  View/Download:16/0  |  Submit date:2018/10/07
Evolutionary multiobjective optimization  interactive multiobjective optimization  multiple criteria decision making  preference information  preference models  
A NEW FIRST-ORDER ALGORITHMIC FRAMEWORK FOR OPTIMIZATION PROBLEMS WITH ORTHOGONALITY CONSTRAINTS 期刊论文
SIAM JOURNAL ON OPTIMIZATION, 2018, 卷号: 28, 期号: 1, 页码: 302-332
Authors:  Gao, Bin;  Liu, Xin;  Chen, Xiaojun;  Yuan, Ya-Xiang
Favorite  |  View/Download:12/0  |  Submit date:2018/07/30
orthogonality constraint  Stiefel manifold  Householder transformation  gradient projection  block coordinate descent