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MUREN: a robust and multi-reference approach of RNA-seq transcript normalization 期刊论文
BMC Bioinformatics, 2021, 卷号: 22, 期号: 1
作者:  Feng,Yance;  Li,Lei M.
收藏  |  浏览/下载：128/0  |  提交时间：2021/10/26
RNA-seq  Normalization  Asymmetrically regulated transcription profiles (ART)  Skewness  Mode  Multi-reference  
Prediction of enhancer–promoter interactions using the cross-cell type information and domain adversarial neural network 期刊论文
BMC Bioinformatics, 2020, 卷号: 21, 期号: 1
作者:  Jing,Fang;  Zhang,Shao-Wu;  Zhang,Shihua
收藏  |  浏览/下载：142/0  |  提交时间：2021/01/14
Enhancer–promoter interactions  Cell line  Convolutional neural network  Transfer learning  Gradient reversal layer  
Transfer posterior error probability estimation for peptide identification 期刊论文
BMC Bioinformatics, 2020, 卷号: 21, 期号: 1
作者:  Yi,Xinpei;  Gong,Fuzhou;  Fu,Yan
收藏  |  浏览/下载：145/0  |  提交时间：2020/05/24
Proteomics  Mass spectrometry  Quality control  Posterior error probability  Local false discovery rate  Transfer learning  
A heterogeneous label propagation approach to explore the potential associations between miRNA and disease 期刊论文
Journal of Translational Medicine, 2018, 卷号: 16, 期号: 1
作者:  Chen,Xing;  Zhang,De-Hong;  You,Zhu-Hong
收藏  |  浏览/下载：231/0  |  提交时间：2019/01/07
miRNA  Disease  miRNA-disease association  Multi-network  Label propagation  
LPG: A four-group probabilistic approach to leveraging pleiotropy in genome-wide association studies 期刊论文
BMC Genomics, 2018, 卷号: 19, 期号: 1
作者:  Yang,Yi;  Dai,Mingwei;  Huang,Jian;  Lin,Xinyi;  Yang,Can;  Chen,Min;  Liu,Jin
收藏  |  浏览/下载：428/0  |  提交时间：2018/07/30
Pleiotropy  Variational Bayesian expectation-maximization  Genome-wide association studies  
Prediction of subcellular location of apoptosis proteins by incorporating PsePSSM and DCCA coefficient based on LFDA dimensionality reduction 期刊论文
BMC Genomics, 2018, 卷号: 19, 期号: 1
作者:  Yu,Bin;  Li,Shan;  Qiu,Wenying;  Wang,Minghui;  Du,Junwei;  Zhang,Yusen;  Chen,Xing
收藏  |  浏览/下载：176/0  |  提交时间：2018/07/30
Apoptosis proteins  Subcellular localization  Pseudo-position specific scoring matrix  Detrended cross-correlation analysis coefficient  Local fisher discriminant analysis  Support vector machine  
Integrating data- and model-driven strategies in systems biology INTRODUCTION 期刊论文
BMC SYSTEMS BIOLOGY, 2018, 卷号: 12, 页码: 3
作者:  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：176/0  |  提交时间：2018/07/30
Integrating data- and model-driven strategies in systems biology 期刊论文
BMC Systems Biology, 2018, 卷号: 12, 期号: Suppl 4
作者:  Wang,Yong;  Zhang,Xiang-Sun;  Chen,Luonan
收藏  |  浏览/下载：201/0  |  提交时间：2018/07/30
Matching biomedical ontologies based on formal concept analysis 期刊论文
JOURNAL OF BIOMEDICAL SEMANTICS, 2018, 卷号: 9, 页码: 27
作者:  Zhao, Mengyi;  Zhang, Songmao;  Li, Weizhuo;  Chen, Guowei
收藏  |  浏览/下载：159/0  |  提交时间：2018/07/30
Ontology matching  Formal concept analysis  Concept lattice  
MKRMDA: multiple kernel learning-based Kronecker regularized least squares for MiRNA-disease association prediction 期刊论文
JOURNAL OF TRANSLATIONAL MEDICINE, 2017, 卷号: 15, 页码: 14
作者:  Chen, Xing;  Niu, Ya-Wei;  Wang, Guang-Hui;  Yan, Gui-Ying
收藏  |  浏览/下载：168/0  |  提交时间：2018/07/30
miRNA  Disease  miRNA-disease association  Multiple kernel learning  Kronecker regularized least squares