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SANA: an algorithm for sequential and non-sequential protein structure alignment 期刊论文
AMINO ACIDS, 2010, 卷号: 39, 期号: 2, 页码: 417-425
作者:  Wang, Lin;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：154/0  |  提交时间：2018/07/30
Protein structure alignment  Fold comparison  Circular permutation  Functional sites  
Prediction of protein-RNA binding sites by a random forest method with combined features 期刊论文
BIOINFORMATICS, 2010, 卷号: 26, 期号: 13, 页码: 1616-1622
作者:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：144/0  |  提交时间：2018/07/30
Lysine acetylation sites prediction using an ensemble of support vector machine classifiers 期刊论文
JOURNAL OF THEORETICAL BIOLOGY, 2010, 卷号: 264, 期号: 1, 页码: 130-135
作者:  Xu, Yan;  Wang, Xiao-Bo;  Ding, Jun;  Wu, Ling-Yun;  Deng, Nai-Yang
收藏  |  浏览/下载：127/0  |  提交时间：2018/07/30
Bioinformatics  Acetylated proteins  Ensemble  SVM  PWMs  EnsemblePail  
Prediction of palmitoylation sites using the composition of k-spaced amino acid pairs 期刊论文
PROTEIN ENGINEERING DESIGN & SELECTION, 2009, 卷号: 22, 期号: 11, 页码: 707-712
作者:  Wang, Xiao-Bo;  Wu, Ling-Yun;  Wang, Yong-Cui;  Deng, Nai-Yang
收藏  |  浏览/下载：114/0  |  提交时间：2018/07/30
CKSAAP-Palm  palmitoylated proteins  palmitoylation  support vector machine  
Evaluating Protein Similarity from Coarse Structures 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2009, 卷号: 6, 期号: 4, 页码: 583-593
作者:  Wang, Yong;  Wu, Ling-Yun;  Zhang, Ji-Hong;  Zhan, Zhong-Wei;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：152/0  |  提交时间：2018/07/30
Protein structure  structure comparison  protein surface  
Self-organizing map approaches for the haplotype assembly problem 期刊论文
MATHEMATICS AND COMPUTERS IN SIMULATION, 2009, 卷号: 79, 期号: 10, 页码: 3026-3037
作者:  Wu, Ling-Yun;  Li, Zhenping;  Wang, Rui-Sheng;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：144/0  |  提交时间：2018/07/30
SNP  Haplotype assembly  Minimum error correction  Self-organizing maps  Neural network  
Predicting DNA- and RNA-binding proteins from sequences with kernel methods 期刊论文
JOURNAL OF THEORETICAL BIOLOGY, 2009, 卷号: 258, 期号: 2, 页码: 289-293
作者:  Shao, Xiaojian;  Tian, Yingjie;  Wu, Lingyun;  Wang, Yong;  Jing, Ling;  Deng, Naiyang
收藏  |  浏览/下载：141/0  |  提交时间：2018/07/30
Bioinformatics  Protein function  Conjoint triad  Nucleic-acid-binding protein  Support vector machine  
Bridging protein local structures and protein functions 期刊论文
AMINO ACIDS, 2008, 卷号: 35, 期号: 3, 页码: 627-650
作者:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：135/0  |  提交时间：2018/07/30
functional genomics  functional motifs  local structures  protein function prediction