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Simple tricks of convolutional neural network architectures improve DNA-protein binding prediction 期刊论文
BIOINFORMATICS, 2019, 卷号: 35, 期号: 11, 页码: 1837-1843
Authors:  Cao, Zhen;  Zhang, Shihua
Favorite  |  View/Download:15/0  |  Submit date:2020/01/10
Edge-group sparse PCA for network-guided high dimensional data analysis 期刊论文
BIOINFORMATICS, 2018, 卷号: 34, 期号: 20, 页码: 3479-3487
Authors:  Min, Wenwen;  Liu, Juan;  Zhang, Shihua
Favorite  |  View/Download:20/0  |  Submit date:2019/01/11
Edge-group sparse PCA for network-guided high dimensional data analysis 期刊论文
BIOINFORMATICS, 2018, 卷号: 34, 期号: 20, 页码: 3479
Authors:  Min, Wenwen;  Liu, Juan;  Zhang, Shihua
Favorite  |  View/Download:12/0  |  Submit date:2019/12/31
DrugE-Rank: improving drug-target interaction prediction of new candidate drugs or targets by ensemble learning to rank 期刊论文
BIOINFORMATICS, 2016, 卷号: 32, 期号: 12, 页码: 18-27
Authors:  Yuan, Qingjun;  Gao, Junning;  Wu, Dongliang;  Zhang, Shihua;  Mamitsuka, Hiroshi;  Zhu, Shanfeng
Favorite  |  View/Download:5/0  |  Submit date:2018/07/30
Integrative analysis for identifying joint modular patterns of gene-expression and drug-response data 期刊论文
BIOINFORMATICS, 2016, 卷号: 32, 期号: 11, 页码: 1724-1732
Authors:  Chen, Jinyu;  Zhang, Shihua
Favorite  |  View/Download:6/0  |  Submit date:2018/07/30
A novel computational framework for simultaneous integration of multiple types of genomic data to identify microRNA-gene regulatory modules 期刊论文
BIOINFORMATICS, 2011, 卷号: 27, 期号: 13, 页码: I401-I409
Authors:  Zhang, Shihua;  Li, Qingjiao;  Liu, Juan;  Zhou, Xianghong Jasmine
Favorite  |  View/Download:9/0  |  Submit date:2018/07/30
A fast mathematical programming procedure for simultaneous fitting of assembly components into cryoEM density maps 期刊论文
BIOINFORMATICS, 2010, 卷号: 26, 期号: 12, 页码: i261-i268
Authors:  Zhang, Shihua;  Vasishtan, Daven;  Xu, Min;  Topf, Maya;  Alber, Frank
Favorite  |  View/Download:4/0  |  Submit date:2018/07/30
Alignment of molecular networks by integer quadratic programming 期刊论文
BIOINFORMATICS, 2007, 卷号: 23, 期号: 13, 页码: 1631-1639
Authors:  Zhenping, Li;  Zhang, Shihua;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
Favorite  |  View/Download:7/0  |  Submit date:2018/07/30