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NeuralEE: A GPU-Accelerated Elastic Embedding Dimensionality Reduction Method for Visualizing Large-Scale scRNA-Seq Data 期刊论文
FRONTIERS IN GENETICS, 2020, 卷号: 11, 页码: 8
Authors:  Xiong, Jiankang;  Gong, Fuzhou;  Wan, Lin;  Ma, Liang
Favorite  |  View/Download:13/0  |  Submit date:2021/01/14
single-cell RNA sequencing  elastic embedding  neural networks  large-scale  stochastic optimization  parametric models  generalizable models  
RobustClone: a robust PCA method for tumor clone and evolution inference from single-cell sequencing data 期刊论文
BIOINFORMATICS, 2020, 卷号: 36, 期号: 11, 页码: 3299-3306
Authors:  Chen, Ziwei;  Gong, Fuzhou;  Wan, Lin;  Ma, Liang
Favorite  |  View/Download:34/0  |  Submit date:2020/09/23
Clustering phase of a general constraint satisfaction problem model d-k-CSP 期刊论文
PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, 2020, 卷号: 537, 页码: 15
Authors:  Xu, Wei;  Gong, Fuzhou;  Zhou, Guangyan
Favorite  |  View/Download:44/0  |  Submit date:2020/05/24
Constraint satisfaction problem  Solution space structure  Clustering phase transition  Problem hardness  Belief propagation  
Multi-scale analysis of schizophrenia risk genes, brain structure, and clinical symptoms reveals integrative clues for subtyping schizophrenia patients 期刊论文
JOURNAL OF MOLECULAR CELL BIOLOGY, 2019, 卷号: 11, 期号: 8, 页码: 678-687
Authors:  Ma, Liang;  Rolls, Edmund T.;  Liu, Xiuqin;  Liu, Yuting;  Jiao, Zeyu;  Wang, Yue;  Gong, Weikang;  Ma, Zhiming;  Gong, Fuzhou;  Wan, Lin
Favorite  |  View/Download:49/0  |  Submit date:2020/05/24
Schizophrenia  PANSS  multi-scale analysis  hot cluster  grey matter volume  pathway  
DensityPath: an algorithm to visualize and reconstruct cell state-transition path on density landscape for single-cell RNA sequencing data 期刊论文
BIOINFORMATICS, 2019, 卷号: 35, 期号: 15, 页码: 2593-2601
Authors:  Chen, Ziwei;  An, Shaokun;  Bai, Xiangqi;  Gong, Fuzhou;  Ma, Liang;  Wan, Lin
Favorite  |  View/Download:47/0  |  Submit date:2020/01/10
PTMiner: Localization and Quality Control of Protein Modifications Detected in an Open Search and Its Application to Comprehensive Post-translational Modification Characterization in Human Proteome 期刊论文
MOLECULAR & CELLULAR PROTEOMICS, 2019, 卷号: 18, 期号: 2, 页码: 391-405
Authors:  An, Zhiwu;  Zhai, Linhui;  Ying, Wantao;  Qian, Xiaohong;  Gong, Fuzhou;  Tan, Minjia;  Fu, Yan
Favorite  |  View/Download:163/0  |  Submit date:2019/03/11
multiscaleanalysisofschizophreniariskgenesbrainstructureandclinicalsymptomsrevealsintegrativecluesforsubtypingschizophreniapatients 期刊论文
journalofmolecularcellbiology, 2019, 卷号: 11, 期号: 8, 页码: 678-687
Authors:  Ma Liang;  Rolls Edmund T;  Liu Xiuqin;  Liu Yuting;  Jiao Zeyu;  Wang Yue;  Gong Weikang;  Ma Zhiming;  Gong Fuzhou;  Wan Lin
Favorite  |  View/Download:37/0  |  Submit date:2020/05/24
Sequential Fair Stackelberg Equilibria of Linear Strategies in Risk-Seeking Insider Trading 期刊论文
JOURNAL OF SYSTEMS SCIENCE & COMPLEXITY, 2018, 卷号: 31, 期号: 5, 页码: 1302-1328
Authors:  Gong Fuzhou;  Zhou Yonghui
Favorite  |  View/Download:49/0  |  Submit date:2018/09/08
Continuous version  insider trading  risk-seeking  sequential fair Stackelberg equilibria  
Quality control of single amino acid variations detected by tandem mass spectrometry 期刊论文
JOURNAL OF PROTEOMICS, 2018, 卷号: 187, 页码: 144-151
Authors:  Yi, Xinpei;  Wang, Bo;  An, Zhiwu;  Gong, Fuzhou;  Li, Jing;  Fu, Yan
Favorite  |  View/Download:114/0  |  Submit date:2018/11/16
Single amino acid variations  Mass spectrometry  Peptide identification  False discovery rate  Unrestrictive mass shift relocalization  
sequentialfairstackelbergequilibriaoflinearstrategiesinriskseekinginsidertrading 期刊论文
journalofsystemsscienceandcomplexity, 2018, 卷号: 031, 期号: 005, 页码: 1302
Authors:  Gong Fuzhou;  Zhou Yonghui
Favorite  |  View/Download:43/0  |  Submit date:2020/01/10