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Multiple-Tissue and Multilevel Analysis on Differentially Expressed Genes and Differentially Correlated Gene Pairs for HFpEF 期刊论文
FRONTIERS IN GENETICS, 2021, 卷号: 12, 页码: 14
Authors:  Zhou, Guofeng;  Sun, Shaoyan;  Yuan, Qiuyue;  Zhang, Run;  Jiang, Ping;  Li, Guangyu;  Wang, Yong;  Li, Xiao
Favorite  |  View/Download:83/0  |  Submit date:2021/10/26
heart failure with preserved ejection fraction  differentially expressed genes  differentially correlated gene pairs  differential network  molecular docking  
Identifying joint biomarker panel from multiple level dataset by an optimization model 期刊论文
BIOMARKERS IN MEDICINE, 2016, 卷号: 10, 期号: 6, 页码: 567-575
Authors:  Zou, Meng;  Zhang, Peng-Jun;  Chen, Luonan;  Tian, Ya-Ping;  Wang, Yong
Favorite  |  View/Download:104/0  |  Submit date:2018/07/30
group lasso optimization  joint biomarker panel  multiple level dataset  
A novel mixed integer programming for multi-biomarker panel identification by distinguishing malignant from benign colorectal tumors 期刊论文
METHODS, 2015, 卷号: 83, 页码: 3-17
Authors:  Zou, Meng;  Zhang, Peng-Jun;  Wen, Xin-Yu;  Chen, Luonan;  Tian, Ya-Ping;  Wang, Yong
Favorite  |  View/Download:99/0  |  Submit date:2018/07/30
Translational bioinformatics  Multi-biomarker  Colorectal cancer  Mixed integer programming  
A computational procedure for identifying master regulator candidates: a case study on diabetes progression in Goto-Kakizaki rats 期刊论文
BMC Systems Biology, 2012, 卷号: 6, 期号: Suppl 1
Authors:  Piao,Guanying;  Saito,Shigeru;  Sun,Yidan;  Liu,Zhi-Ping;  Wang,Yong;  Han,Xiao;  Wu,Jiarui;  Zhou,Huarong;  Chen,Luonan;  Horimoto,Katsuhisa
Favorite  |  View/Download:110/0  |  Submit date:2018/07/30
NOA: a novel Network Ontology Analysis method 期刊论文
NUCLEIC ACIDS RESEARCH, 2011, 卷号: 39, 期号: 13, 页码: 12
Authors:  Wang, Jiguang;  Huang, Qiang;  Liu, Zhi-Ping;  Wang, Yong;  Wu, Ling-Yun;  Chen, Luonan;  Zhang, Xiang-Sun
Favorite  |  View/Download:125/0  |  Submit date:2018/07/30
Detecting and analyzing differentially activated pathways in brain regions of Alzheimer's disease patients 期刊论文
MOLECULAR BIOSYSTEMS, 2011, 卷号: 7, 期号: 5, 页码: 1441-1452
Authors:  Liu, Zhi-Ping;  Wang, Yong;  Zhang, Xiang-Sun;  Xia, Weiming;  Chen, Luonan
Favorite  |  View/Download:97/0  |  Submit date:2018/07/30
Identifying dysfunctional crosstalk of pathways in various regions of Alzheimer's disease brains 期刊论文
BMC SYSTEMS BIOLOGY, 2010, 卷号: 4, 页码: 12
Authors:  Liu, Zhi-Ping;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
Favorite  |  View/Download:104/0  |  Submit date:2018/07/30
Prediction of protein-RNA binding sites by a random forest method with combined features 期刊论文
BIOINFORMATICS, 2010, 卷号: 26, 期号: 13, 页码: 1616-1622
Authors:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
Favorite  |  View/Download:109/0  |  Submit date:2018/07/30
Bridging protein local structures and protein functions 期刊论文
AMINO ACIDS, 2008, 卷号: 35, 期号: 3, 页码: 627-650
Authors:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
Favorite  |  View/Download:104/0  |  Submit date:2018/07/30
functional genomics  functional motifs  local structures  protein function prediction  
Analysis of protein surface patterns by pocket similarity network 期刊论文
PROTEIN AND PEPTIDE LETTERS, 2008, 卷号: 15, 期号: 5, 页码: 448-455
Authors:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
Favorite  |  View/Download:130/0  |  Submit date:2018/07/30
protein surface pattern  pocket similarity  complex network  functional genomics  systems biology