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OpenAnnotate: a web server to annotate the chromatin accessibility of genomic regions 期刊论文
NUCLEIC ACIDS RESEARCH, 2021, 卷号: 49, 期号: W1, 页码: W483-W490
Authors:  Chen, Shengquan;  Liu, Qiao;  Cui, Xuejian;  Feng, Zhanying;  Li, Chunquan;  Wang, Xiaowo;  Zhang, Xuegong;  Wang, Yong;  Jiang, Rui
Favorite  |  View/Download:1/0  |  Submit date:2021/10/26
Modes of genetic adaptations underlying functional innovations in the rumen 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2020, 页码: 21
Authors:  Pan, Xiangyu;  Cai, Yudong;  Li, Zongjun;  Chen, Xianqing;  Heller, Rasmus;  Wang, Nini;  Wang, Yu;  Zhao, Chen;  Wang, Yong;  Xu, Han;  Li, Songhai;  Li, Ming;  Li, Cunyuan;  Hu, Shengwei;  Li, Hui;  Wang, Kun;  Chen, Lei;  Wei, Bin;  Zheng, Zhuqing;  Fu, Weiwei;  Yang, Yue;  Zhang, Tingting;  Hou, Zhuoting;  Yan, Yueyang;  Lv, Xiaoyang;  Sun, Wei;  Li, Xinyu;  Huang, Shisheng;  Liu, Lixiang;  Mao, Shengyong;  Liu, Wenqing;  Hua, Jinlian;  Li, Zhipeng;  Zhang, Guojie;  Chen, Yulin;  Wang, Xihong;  Qiu, Qiang;  Dalrymple, Brian P.;  Wang, Wen;  Jiang, Yu
Favorite  |  View/Download:36/0  |  Submit date:2021/01/14
rumen innovations  comparative transcriptomics  comparative genomics  evo-devo  evolution of organs  
Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation 期刊论文
NATURE COMMUNICATIONS, 2020, 卷号: 11, 期号: 1, 页码: 20
Authors:  Xin, Jingxue;  Zhang, Hui;  He, Yaoxi;  Duren, Zhana;  Bai, Caijuan;  Chen, Lang;  Luo, Xin;  Yan, Dong-Sheng;  Zhang, Chaoyu;  Zhu, Xiang;  Yuan, Qiuyue;  Feng, Zhanying;  Cui, Chaoying;  Qi, Xuebin;  Ouzhuluobu;  Wong, Wing Hung;  Wang, Yong;  Su, Bing
Favorite  |  View/Download:11/0  |  Submit date:2021/01/14
Soliton formation and stability under the interplay between parity-time-symmetric generalized Scarf-II potentials and Kerr nonlinearity 期刊论文
PHYSICAL REVIEW E, 2020, 卷号: 102, 期号: 1, 页码: 11
Authors:  Chen, Yong;  Yan, Zhenya;  Mihalache, Dumitru
Favorite  |  View/Download:20/0  |  Submit date:2020/09/23
Quantile regression in big data: A divide and conquer based strategy 期刊论文
COMPUTATIONAL STATISTICS & DATA ANALYSIS, 2020, 卷号: 144, 页码: 17
Authors:  Chen, Lanjue;  Zhou, Yong
Favorite  |  View/Download:20/0  |  Submit date:2020/05/24
Data stream  Divide and conquer  Estimating equation  Massive data sets  Quantile regression  
Time course regulatory analysis based on paired expression and chromatin accessibility data 期刊论文
GENOME RESEARCH, 2020, 卷号: 30, 期号: 4, 页码: 622-634
Authors:  Duren, Zhana;  Chen, Xi;  Xin, Jingxue;  Wang, Yong;  Wong, Wing Hung
Favorite  |  View/Download:33/0  |  Submit date:2020/06/30
zokordbtissuespecificregulatorynetworkannotationfornoncodingelementsofplateauzokor 期刊论文
quantitativebiology, 2020, 卷号: 8, 期号: 1, 页码: 43-50
Authors:  Xin Jingxue;  Hao Junjun;  Chen Lang;  Zhang Tao;  Li Lei;  Chen Luonan;  Zhao Wenmin;  Lu Xuemei;  Shi Peng;  Wang Yong
Favorite  |  View/Download:53/0  |  Submit date:2020/06/30
tissue specific regulatory network  non-coding element  plateau zokor  non-model species  
Associating lncRNAs with small molecules via bilevel optimization reveals cancer-related lncRNAs 期刊论文
PLOS COMPUTATIONAL BIOLOGY, 2019, 卷号: 15, 期号: 12, 页码: 20
Authors:  Wang, Yongcui;  Chen, Shilong;  Chen, Luonan;  Wang, Yong
Favorite  |  View/Download:35/0  |  Submit date:2020/05/24
DC3 is a method for deconvolution and coupled clustering from bulk and single-cell genomics data 期刊论文
NATURE COMMUNICATIONS, 2019, 卷号: 10, 页码: 11
Authors:  Zeng, Wanwen;  Chen, Xi;  Duren, Zhana;  Wang, Yong;  Jiang, Rui;  Wong, Wing Hung
Favorite  |  View/Download:46/0  |  Submit date:2020/01/10
Hierarchical graphical model reveals HFR1 bridging circadian rhythm and flower development in Arabidopsis thaliana 期刊论文
NPJ SYSTEMS BIOLOGY AND APPLICATIONS, 2019, 卷号: 5, 页码: 11
Authors:  Duren, Zhana;  Wang, Yaling;  Wang, Jiguang;  Zhao, Xing-Ming;  Lv, Le;  Li, Xiaobo;  Liu, Jingdong;  Zhu, Xin-Guang;  Chen, Luonan;  Wang, Yong
Favorite  |  View/Download:41/0  |  Submit date:2020/05/24