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Annotating regulatory elements by heterogeneous network embedding 期刊论文
BIOINFORMATICS, 2022, 页码: 13
作者:  Lu, Yurun;  Feng, Zhanying;  Zhang, Songmao;  Wang, Yong
收藏  |  浏览/下载:139/0  |  提交时间:2022/06/21
Multiple-Tissue and Multilevel Analysis on Differentially Expressed Genes and Differentially Correlated Gene Pairs for HFpEF 期刊论文
FRONTIERS IN GENETICS, 2021, 卷号: 12, 页码: 14
作者:  Zhou, Guofeng;  Sun, Shaoyan;  Yuan, Qiuyue;  Zhang, Run;  Jiang, Ping;  Li, Guangyu;  Wang, Yong;  Li, Xiao
收藏  |  浏览/下载:129/0  |  提交时间:2021/10/26
heart failure with preserved ejection fraction  differentially expressed genes  differentially correlated gene pairs  differential network  molecular docking  
Revealing transcription factor and histone modification co-localization and dynamics across cell lines by integrating ChIP-seq and RNA-seq data 期刊论文
BMC GENOMICS, 2018, 卷号: 19, 页码: 16
作者:  Zhang, Lirong;  Xue, Gaogao;  Liu, Junjie;  Li, Qianzhong;  Wang, Yong
收藏  |  浏览/下载:272/0  |  提交时间:2019/01/11
Transcription factor  Histone modification  Co-localization  Dynamics  
Hybrid method to solve HP model on 3D lattice and to probe protein stability upon amino acid mutations 期刊论文
BMC SYSTEMS BIOLOGY, 2017, 卷号: 11, 页码: 13
作者:  Guo, Yuzhen;  Tao, Fengying;  Wu, Zikai;  Wang, Yong
收藏  |  浏览/下载:160/0  |  提交时间:2018/07/30
Protein structure prediction  HP model  3D lattice  Particle swarm optimization  Protein stability  
Computational probing protein-protein interactions targeting small molecules 期刊论文
BIOINFORMATICS, 2016, 卷号: 32, 期号: 2, 页码: 226-234
作者:  Wang, Yong-Cui;  Chen, Shi-Long;  Deng, Nai-Yang;  Wang, Yong
收藏  |  浏览/下载:134/0  |  提交时间:2018/07/30
Identifying network biomarkers based on protein-protein interactions and expression data 期刊论文
BMC MEDICAL GENOMICS, 2015, 卷号: 8, 页码: 11
作者:  Xin, Jingxue;  Ren, Xianwen;  Chen, Luonan;  Wang, Yong
收藏  |  浏览/下载:126/0  |  提交时间:2018/07/30
Kernel-based data fusion improves the drug-protein interaction prediction 期刊论文
COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2011, 卷号: 35, 期号: 6, 页码: 353-362
作者:  Wang, Yong-Cui;  Zhang, Chun-Hua;  Deng, Nai-Yang;  Wang, Yong
收藏  |  浏览/下载:142/0  |  提交时间:2018/07/30
Drug-target interaction  Chemical space  Pharmacological space  Therapeutic space  Genomic space  Kernel function  Support vector machine  
Improving accuracy of protein-protein interaction prediction by considering the converse problem for sequence representation 期刊论文
BMC BIOINFORMATICS, 2011, 卷号: 12, 页码: 9
作者:  Ren, Xianwen;  Wang, Yong-Cui;  Wang, Yong;  Zhang, Xiang-Sun;  Deng, Nai-Yang
收藏  |  浏览/下载:136/0  |  提交时间:2018/07/30
Rigorous assessment and integration of the sequence and structure based features to predict hot spots 期刊论文
BMC BIOINFORMATICS, 2011, 卷号: 12, 页码: 14
作者:  Chen, Ruoying;  Chen, Wenjing;  Yang, Sixiao;  Wu, Di;  Wang, Yong;  Tian, Yingjie;  Shi, Yong
收藏  |  浏览/下载:126/0  |  提交时间:2018/07/30
NOA: a novel Network Ontology Analysis method 期刊论文
NUCLEIC ACIDS RESEARCH, 2011, 卷号: 39, 期号: 13, 页码: 12
作者:  Wang, Jiguang;  Huang, Qiang;  Liu, Zhi-Ping;  Wang, Yong;  Wu, Ling-Yun;  Chen, Luonan;  Zhang, Xiang-Sun
收藏  |  浏览/下载:155/0  |  提交时间:2018/07/30