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Annotating regulatory elements by heterogeneous network embedding 期刊论文
BIOINFORMATICS, 2022, 页码: 13
Authors:  Lu, Yurun;  Feng, Zhanying;  Zhang, Songmao;  Wang, Yong
Favorite  |  View/Download：68/0  |  Submit date：2022/06/21
hReg-CNCC reconstructs a regulatory network in human cranial neural crest cells and annotates variants in a developmental context 期刊论文
COMMUNICATIONS BIOLOGY, 2021, 卷号: 4, 期号: 1, 页码: 16
Authors:  Feng, Zhanying;  Duren, Zhana;  Xiong, Ziyi;  Wang, Sijia;  Liu, Fan;  Wong, Wing Hung;  Wang, Yong
Favorite  |  View/Download：106/0  |  Submit date：2021/06/01
Modes of genetic adaptations underlying functional innovations in the rumen 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2020, 页码: 21
Authors:  Pan, Xiangyu;  Cai, Yudong;  Li, Zongjun;  Chen, Xianqing;  Heller, Rasmus;  Wang, Nini;  Wang, Yu;  Zhao, Chen;  Wang, Yong;  Xu, Han;  Li, Songhai;  Li, Ming;  Li, Cunyuan;  Hu, Shengwei;  Li, Hui;  Wang, Kun;  Chen, Lei;  Wei, Bin;  Zheng, Zhuqing;  Fu, Weiwei;  Yang, Yue;  Zhang, Tingting;  Hou, Zhuoting;  Yan, Yueyang;  Lv, Xiaoyang;  Sun, Wei;  Li, Xinyu;  Huang, Shisheng;  Liu, Lixiang;  Mao, Shengyong;  Liu, Wenqing;  Hua, Jinlian;  Li, Zhipeng;  Zhang, Guojie;  Chen, Yulin;  Wang, Xihong;  Qiu, Qiang;  Dalrymple, Brian P.;  Wang, Wen;  Jiang, Yu
Favorite  |  View/Download：129/0  |  Submit date：2021/01/14
rumen innovations  comparative transcriptomics  comparative genomics  evo-devo  evolution of organs  
Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation 期刊论文
NATURE COMMUNICATIONS, 2020, 卷号: 11, 期号: 1, 页码: 20
Authors:  Xin, Jingxue;  Zhang, Hui;  He, Yaoxi;  Duren, Zhana;  Bai, Caijuan;  Chen, Lang;  Luo, Xin;  Yan, Dong-Sheng;  Zhang, Chaoyu;  Zhu, Xiang;  Yuan, Qiuyue;  Feng, Zhanying;  Cui, Chaoying;  Qi, Xuebin;  Ouzhuluobu;  Wong, Wing Hung;  Wang, Yong;  Su, Bing
Favorite  |  View/Download：98/0  |  Submit date：2021/01/14
CoMM-S-2: a collaborative mixed model using summary statistics in transcriptome-wide association studies 期刊论文
BIOINFORMATICS, 2020, 卷号: 36, 期号: 7, 页码: 2009-2016
Authors:  Yang, Yi;  Shi, Xingjie;  Jiao, Yuling;  Huang, Jian;  Chen, Min;  Zhou, Xiang;  Sun, Lei;  Lin, Xinyi;  Yang, Can;  Liu, Jin
Favorite  |  View/Download：168/0  |  Submit date：2020/06/30
Genetic Load and Potential Mutational Meltdown in Cancer Cell Populations 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2019, 卷号: 36, 期号: 3, 页码: 541-552
Authors:  Zhang, Yuezheng;  Li, Yawei;  Li, Tao;  Shen, Xu;  Zhu, Tianqi;  Tao, Yong;  Li, Xueying;  Wang, Di;  Ma, Qin;  Hu, Zheng;  Liu, Jialin;  Ruan, Jue;  Cai, Jun;  Wang, Hurng-Yi;  Lu, Xuemei
Favorite  |  View/Download：160/0  |  Submit date：2020/01/10
genetic load  Muller's ratchet  HeLa cell line  copy number variation  
LPG: A four-group probabilistic approach to leveraging pleiotropy in genome-wide association studies 期刊论文
BMC Genomics, 2018, 卷号: 19, 期号: 1
Authors:  Yang,Yi;  Dai,Mingwei;  Huang,Jian;  Lin,Xinyi;  Yang,Can;  Chen,Min;  Liu,Jin
Favorite  |  View/Download：230/0  |  Submit date：2018/07/30
Pleiotropy  Variational Bayesian expectation-maximization  Genome-wide association studies  
Integrative cancer genomics: models, algorithms and analysis 期刊论文
FRONTIERS OF COMPUTER SCIENCE, 2017, 卷号: 11, 期号: 3, 页码: 392-406
Authors:  Chen, Jinyu;  Zhang, Shihua
Favorite  |  View/Download：104/0  |  Submit date：2018/07/30
cancer genomics  model  algorithm  data integration  bioinformatics  computational biology  
integrativecancergenomicsmodelsalgorithmsandanalysis 期刊论文
frontiersofcomputerscience, 2017, 卷号: 11, 期号: 3, 页码: 392
Authors:  Chen Jinyu;  Zhang Shihua
Favorite  |  View/Download：87/0  |  Submit date：2020/01/10
Modeling the causal regulatory network by integrating chromatin accessibility and transcriptome data 期刊论文
NATIONAL SCIENCE REVIEW, 2016, 卷号: 3, 期号: 2, 页码: 240-251
Authors:  Wang, Yong;  Jiang, Rui;  Wong, Wing Hung
Favorite  |  View/Download：84/0  |  Submit date：2018/07/30
gene regulatory network  open chromatin  DNA accessibility  transcription factor colocalization  statistical model  data integration