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Revealing transcription factor and histone modification co-localization and dynamics across cell lines by integrating ChIP-seq and RNA-seq data 期刊论文
BMC GENOMICS, 2018, 卷号: 19, 页码: 16
作者:  Zhang, Lirong;  Xue, Gaogao;  Liu, Junjie;  Li, Qianzhong;  Wang, Yong
收藏  |  浏览/下载:270/0  |  提交时间:2019/01/11
Transcription factor  Histone modification  Co-localization  Dynamics  
Computational probing protein-protein interactions targeting small molecules 期刊论文
BIOINFORMATICS, 2016, 卷号: 32, 期号: 2, 页码: 226-234
作者:  Wang, Yong-Cui;  Chen, Shi-Long;  Deng, Nai-Yang;  Wang, Yong
收藏  |  浏览/下载:133/0  |  提交时间:2018/07/30
A novel mixed integer programming for multi-biomarker panel identification by distinguishing malignant from benign colorectal tumors 期刊论文
METHODS, 2015, 卷号: 83, 页码: 3-17
作者:  Zou, Meng;  Zhang, Peng-Jun;  Wen, Xin-Yu;  Chen, Luonan;  Tian, Ya-Ping;  Wang, Yong
收藏  |  浏览/下载:139/0  |  提交时间:2018/07/30
Translational bioinformatics  Multi-biomarker  Colorectal cancer  Mixed integer programming  
Revealing metabolite biomarkers for acupuncture treatment by linear programming based feature selection 期刊论文
BMC Systems Biology, 2012, 卷号: 6, 期号: Suppl 1
作者:  Wang,Yong;  Wu,Qiao-Feng;  Chen,Chen;  Wu,Ling-Yun;  Yan,Xian-Zhong;  Yu,Shu-Guang;  Zhang,Xiang-Sun;  Liang,Fan-Rong
收藏  |  浏览/下载:165/0  |  提交时间:2018/07/30
Kernel-based data fusion improves the drug-protein interaction prediction 期刊论文
COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2011, 卷号: 35, 期号: 6, 页码: 353-362
作者:  Wang, Yong-Cui;  Zhang, Chun-Hua;  Deng, Nai-Yang;  Wang, Yong
收藏  |  浏览/下载:140/0  |  提交时间:2018/07/30
Drug-target interaction  Chemical space  Pharmacological space  Therapeutic space  Genomic space  Kernel function  Support vector machine  
Support vector machine prediction of enzyme function with conjoint triad feature and hierarchical context 期刊论文
BMC SYSTEMS BIOLOGY, 2011, 卷号: 5, 页码: 11
作者:  Wang, Yong-Cui;  Wang, Yong;  Yang, Zhi-Xia;  Deng, Nai-Yang
收藏  |  浏览/下载:136/0  |  提交时间:2018/07/30
Computationally Probing Drug-Protein Interactions Via Support Vector Machine 期刊论文
LETTERS IN DRUG DESIGN & DISCOVERY, 2010, 卷号: 7, 期号: 5, 页码: 370-378
作者:  Wang, Yong-Cui;  Yang, Zhi-Xia;  Wang, Yong;  Deng, Nai-Yang
收藏  |  浏览/下载:118/0  |  提交时间:2018/07/30
Drug-target interaction  Chemical structure  Protein sequence  Imbalance problem  Support vector machine  
Identifying translation initiation sites in prokaryotes using support vector machine 期刊论文
JOURNAL OF THEORETICAL BIOLOGY, 2010, 卷号: 262, 期号: 4, 页码: 644-649
作者:  Gao, Tingting;  Yang, Zhixia;  Wang, Yong;  Jing, Ling
收藏  |  浏览/下载:126/0  |  提交时间:2018/07/30
Translation initiation site prediction  Support vector machine  Position specific weight matrix