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A hybrid graph-theoretic method for mining overlapping functional modules in large sparse protein interaction networks 期刊论文
INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, 2009, 卷号: 3, 期号: 1, 页码: 68-84
作者:  Zhang, Shihua;  Liu, Hong-Wei;  Ning, Xue-Mei;  Zhang, Xiang-Sun
收藏  |  浏览/下载：206/0  |  提交时间：2018/07/30
PPI  protein-protein interaction network  network clustering  LGT  line graph transformation  protein complexes  functional modules  data mining  bioinformatics  
Clustering complex networks and biological networks by nonnegative matrix factorization with various similarity measures 期刊论文
NEUROCOMPUTING, 2008, 卷号: 72, 期号: 1-3, 页码: 134-141
作者:  Wang, Rui-Sheng;  Zhang, Shihua;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：135/0  |  提交时间：2018/07/30
Complex networks  Biological networks  Community structure  Nonnegative matrix factorization  Similarity measure  
Identification of overlapping community structure in complex networks using fuzzy c-means clustering 期刊论文
PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, 2007, 卷号: 374, 期号: 1, 页码: 483-490
作者:  Zhang, Shihua;  Wang, Rui-Sheng;  Zhang, Xiang-Sun
收藏  |  浏览/下载：133/0  |  提交时间：2018/07/30
overlapping community structure  modular function  spectral mapping  fuzzy c-means clustering  complex network  
Identification of functional modules in a PPI network by clique percolation clustering 期刊论文
COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2006, 卷号: 30, 期号: 6, 页码: 445-451
作者:  Zhang, Shihua;  Ning, Xuemei;  Zhang, Xiang-Sun
收藏  |  浏览/下载：127/0  |  提交时间：2018/07/30
protein-protein interaction (PPI) network  network clustering  protein complexes  functional modules  clique percolation clustering