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MIMIC: an optimization method to identify cell type-specific marker panel for cell sorting 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2021, 卷号: 22, 期号: 6, 页码: 14
作者:  Zou, Meng;  Duren, Zhana;  Yuan, Qiuyue;  Li, Henry;  Hutchins, Andrew Paul;  Wong, Wing Hung;  Wang, Yong
收藏  |  浏览/下载：145/0  |  提交时间：2022/04/02
cell type-specific marker  TFs  surface markers  dimension reduction  hierarchical topology  
ELF: Extract Landmark Features By Optimizing Topology Maintenance, Redundancy, and Specificity 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 2, 页码: 411-421
作者:  Feng, Zhan-Ying;  Wang, Yong
收藏  |  浏览/下载：185/0  |  提交时间：2020/05/24
Feature extraction  Topology  Ground penetrating radar  Geophysical measurement techniques  Redundancy  Maintenance engineering  Manganese  Feature selection  topology maintenance  optimization  single cell  
Probe Efficient Feature Representation of Gapped K-mer Frequency Vectors from Sequences Using Deep Neural Networks 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 2, 页码: 657-667
作者:  Cao, Zhen;  Zhang, Shihua
收藏  |  浏览/下载：188/0  |  提交时间：2020/05/24
DNA  Bioinformatics  Kernel  Feature extraction  Support vector machines  Genomics  Task analysis  Bioinformatics  machine learning  gapped k-mer  deep neural network  transcription factor binding site prediction  
Applying Ricci flow to high dimensional manifold learning 期刊论文
SCIENCE CHINA-INFORMATION SCIENCES, 2019, 卷号: 62, 期号: 9, 页码: 14
作者:  Li, Yangyang;  Lu, Ruqian
收藏  |  浏览/下载：157/0  |  提交时间：2020/01/10
manifold learning  Ricci flow  Ricci curvature  dimension reduction  curvature estimation  
Edge-group sparse PCA for network-guided high dimensional data analysis 期刊论文
BIOINFORMATICS, 2018, 卷号: 34, 期号: 20, 页码: 3479-3487
作者:  Min, Wenwen;  Liu, Juan;  Zhang, Shihua
收藏  |  浏览/下载：189/0  |  提交时间：2019/01/11
Robust Reconstruction of Continuously Time-Varying Topologies of Weighted Networks 期刊论文
IEEE TRANSACTIONS ON CIRCUITS AND SYSTEMS I-REGULAR PAPERS, 2018, 卷号: 65, 期号: 9, 页码: 2970-2982
作者:  Liu, Juan;  Mei, Guofeng;  Wu, Xiaoqun;  Lu, Jinhu
收藏  |  浏览/下载：161/0  |  提交时间：2018/09/08
Time-varying and state-dependent network topology  structure reconstruction  Taylor expansion  alternating direction method of multipliers (ADMM)  
Locality preserving projection on SPD matrix Lie group: algorithm and analysis 期刊论文
SCIENCE CHINA-INFORMATION SCIENCES, 2018, 卷号: 61, 期号: 9, 页码: 15
作者:  Li, Yangyang;  Lu, Ruqian
收藏  |  浏览/下载：165/0  |  提交时间：2018/07/30
manifold learning  SPD matrix Lie group  locally preserving projection  Laplace operator  Log Euclidean metric  
Dimension reduction estimation for probability density with data missing at random when covariables are present 期刊论文
JOURNAL OF STATISTICAL PLANNING AND INFERENCE, 2017, 卷号: 181, 页码: 11-29
作者:  Deng, Jianqiu;  Wang, Qihua
收藏  |  浏览/下载：149/0  |  提交时间：2018/07/30
Kernel density estimation  Kernel regression  Dimension reduction  Missing at random  Asymptotic normality