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Modes of genetic adaptations underlying functional innovations in the rumen 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2020, 页码: 21
作者:  Pan, Xiangyu;  Cai, Yudong;  Li, Zongjun;  Chen, Xianqing;  Heller, Rasmus;  Wang, Nini;  Wang, Yu;  Zhao, Chen;  Wang, Yong;  Xu, Han;  Li, Songhai;  Li, Ming;  Li, Cunyuan;  Hu, Shengwei;  Li, Hui;  Wang, Kun;  Chen, Lei;  Wei, Bin;  Zheng, Zhuqing;  Fu, Weiwei;  Yang, Yue;  Zhang, Tingting;  Hou, Zhuoting;  Yan, Yueyang;  Lv, Xiaoyang;  Sun, Wei;  Li, Xinyu;  Huang, Shisheng;  Liu, Lixiang;  Mao, Shengyong;  Liu, Wenqing;  Hua, Jinlian;  Li, Zhipeng;  Zhang, Guojie;  Chen, Yulin;  Wang, Xihong;  Qiu, Qiang;  Dalrymple, Brian P.;  Wang, Wen;  Jiang, Yu
收藏  |  浏览/下载：196/0  |  提交时间：2021/01/14
rumen innovations  comparative transcriptomics  comparative genomics  evo-devo  evolution of organs  
DC3 is a method for deconvolution and coupled clustering from bulk and single-cell genomics data 期刊论文
NATURE COMMUNICATIONS, 2019, 卷号: 10, 页码: 11
作者:  Zeng, Wanwen;  Chen, Xi;  Duren, Zhana;  Wang, Yong;  Jiang, Rui;  Wong, Wing Hung
收藏  |  浏览/下载：179/0  |  提交时间：2020/01/10
Revealing transcription factor and histone modification co-localization and dynamics across cell lines by integrating ChIP-seq and RNA-seq data 期刊论文
BMC GENOMICS, 2018, 卷号: 19, 页码: 16
作者:  Zhang, Lirong;  Xue, Gaogao;  Liu, Junjie;  Li, Qianzhong;  Wang, Yong
收藏  |  浏览/下载：268/0  |  提交时间：2019/01/11
Transcription factor  Histone modification  Co-localization  Dynamics  
Integrative analysis of single-cell genomics data by coupled nonnegative matrix factorizations 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2018, 卷号: 115, 期号: 30, 页码: 7723-7728
作者:  Duren, Zhana;  Chen, Xi;  Zamanighomi, Mahdi;  Zeng, Wanwen;  Satpathy, Ansuman T.;  Chang, Howard Y.;  Wang, Yong;  Wong, Wing Hung
收藏  |  浏览/下载：176/0  |  提交时间：2019/12/13
coupled clustering  NMF  single-cell genomic data  
Revealing transcription factor and histone modification co-localization and dynamics across cell lines by integrating ChIP-seq and RNA-seq data 期刊论文
BMC GENOMICS, 2018, 卷号: 19
作者:  Zhang, Lirong;  Xue, Gaogao;  Liu, Junjie;  Li, Qianzhong;  Wang, Yong
收藏  |  浏览/下载：224/0  |  提交时间：2019/04/03
Identifying network biomarkers based on protein-protein interactions and expression data 期刊论文
BMC MEDICAL GENOMICS, 2015, 卷号: 8, 页码: 11
作者:  Xin, Jingxue;  Ren, Xianwen;  Chen, Luonan;  Wang, Yong
收藏  |  浏览/下载：123/0  |  提交时间：2018/07/30
Revealing metabolite biomarkers for acupuncture treatment by linear programming based feature selection 期刊论文
BMC Systems Biology, 2012, 卷号: 6, 期号: Suppl 1
作者:  Wang,Yong;  Wu,Qiao-Feng;  Chen,Chen;  Wu,Ling-Yun;  Yan,Xian-Zhong;  Yu,Shu-Guang;  Zhang,Xiang-Sun;  Liang,Fan-Rong
收藏  |  浏览/下载：163/0  |  提交时间：2018/07/30
Bridging protein local structures and protein functions 期刊论文
AMINO ACIDS, 2008, 卷号: 35, 期号: 3, 页码: 627-650
作者:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：131/0  |  提交时间：2018/07/30
functional genomics  functional motifs  local structures  protein function prediction  
Analysis of protein surface patterns by pocket similarity network 期刊论文
PROTEIN AND PEPTIDE LETTERS, 2008, 卷号: 15, 期号: 5, 页码: 448-455
作者:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：157/0  |  提交时间：2018/07/30
protein surface pattern  pocket similarity  complex network  functional genomics  systems biology  
Inferring protein interactions from experimental data by association probabilistic method 期刊论文
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2006, 卷号: 62, 期号: 4, 页码: 833-837
作者:  Chen, LN;  Wu, LY;  Wang, Y;  Zhang, XS
收藏  |  浏览/下载：132/0  |  提交时间：2018/07/30
protein interaction  domain interaction  protein network  bioinformatics