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Inferring a protein interaction map of Mycobacterium tuberculosis based on sequences and interologs 期刊论文
BMC Bioinformatics, 2012, 卷号: 13, 期号: Suppl 7
作者:  Liu,Zhi-Ping;  Wang,Jiguang;  Qiu,Yu-Qing;  Leung,Ross KK;  Zhang,Xiang-Sun;  Tsui,Stephen KW;  Chen,Luonan
收藏  |  浏览/下载：102/0  |  提交时间：2018/07/30
Determining modular organization of protein interaction networks by maximizing modularity density 期刊论文
BMC SYSTEMS BIOLOGY, 2010, 卷号: 4, 页码: 12
作者:  Zhang, Shihua;  Ning, Xue-Mei;  Ding, Chris;  Zhang, Xiang-Sun
收藏  |  浏览/下载：140/0  |  提交时间：2018/07/30
SANA: an algorithm for sequential and non-sequential protein structure alignment 期刊论文
AMINO ACIDS, 2010, 卷号: 39, 期号: 2, 页码: 417-425
作者:  Wang, Lin;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：153/0  |  提交时间：2018/07/30
Protein structure alignment  Fold comparison  Circular permutation  Functional sites  
Prediction of protein-RNA binding sites by a random forest method with combined features 期刊论文
BIOINFORMATICS, 2010, 卷号: 26, 期号: 13, 页码: 1616-1622
作者:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：142/0  |  提交时间：2018/07/30
A Network Biology Study on Circadian Rhythm by Integrating Various Omics Data 期刊论文
OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY, 2009, 卷号: 13, 期号: 4, 页码: 313-324
作者:  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：123/0  |  提交时间：2018/07/30
A hybrid graph-theoretic method for mining overlapping functional modules in large sparse protein interaction networks 期刊论文
INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, 2009, 卷号: 3, 期号: 1, 页码: 68-84
作者:  Zhang, Shihua;  Liu, Hong-Wei;  Ning, Xue-Mei;  Zhang, Xiang-Sun
收藏  |  浏览/下载：200/0  |  提交时间：2018/07/30
PPI  protein-protein interaction network  network clustering  LGT  line graph transformation  protein complexes  functional modules  data mining  bioinformatics  
Clustering complex networks and biological networks by nonnegative matrix factorization with various similarity measures 期刊论文
NEUROCOMPUTING, 2008, 卷号: 72, 期号: 1-3, 页码: 134-141
作者:  Wang, Rui-Sheng;  Zhang, Shihua;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：132/0  |  提交时间：2018/07/30
Complex networks  Biological networks  Community structure  Nonnegative matrix factorization  Similarity measure  
Bridging protein local structures and protein functions 期刊论文
AMINO ACIDS, 2008, 卷号: 35, 期号: 3, 页码: 627-650
作者:  Liu, Zhi-Ping;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：132/0  |  提交时间：2018/07/30
functional genomics  functional motifs  local structures  protein function prediction  
Biomolecular network querying: a promising approach in systems biology 期刊论文
BMC SYSTEMS BIOLOGY, 2008, 卷号: 2, 页码: 6
作者:  Zhang, Shihua;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：108/0  |  提交时间：2018/07/30
Analysis on multi-domain cooperation for predicting protein-protein interactions 期刊论文
BMC BIOINFORMATICS, 2007, 卷号: 8, 页码: 20
作者:  Wang, Rui-Sheng;  Wang, Yong;  Wu, Ling-Yun;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：139/0  |  提交时间：2018/07/30