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Interaction-based transcriptome analysis via differential network inference 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2022, 页码: 11
作者:  Leng, Jiacheng;  Wu, Ling-Yun
收藏  |  浏览/下载：47/0  |  提交时间：2023/02/07
differential network inference  differential expression analysis  interaction-based transcriptome analysis  
Importance-Penalized Joint Graphical Lasso (IPJGL): differential network inference via GGMs 期刊论文
BIOINFORMATICS, 2022, 卷号: 38, 期号: 3, 页码: 770-777
作者:  Leng, Jiacheng;  Wu, Ling-Yun
收藏  |  浏览/下载：143/0  |  提交时间：2022/04/02
Discovering cooperative biomarkers for heterogeneous complex disease diagnoses 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 89-101
作者:  Sun, Duanchen;  Ren, Xianwen;  Ari, Eszter;  Korcsmaros, Tamas;  Csermely, Peter;  Wu, Ling-Yun
收藏  |  浏览/下载：293/0  |  提交时间：2019/03/05
heterogeneous diseases  cancer biomarker  network-based  cooperative biomarker  gene expression  
NetGen: a novel network-based probabilistic generative model for gene set functional enrichment analysis 期刊论文
BMC SYSTEMS BIOLOGY, 2017, 卷号: 11, 页码: 14
作者:  Sun, Duanchen;  Liu, Yinliang;  Zhang, Xiang-Sun;  Wu, Ling-Yun
收藏  |  浏览/下载：134/0  |  提交时间：2018/07/30
Gene ontology  Enrichment analysis  Network-based probabilistic generative model  Integer programming  Complex diseases  
Self-organizing map approaches for the haplotype assembly problem 期刊论文
MATHEMATICS AND COMPUTERS IN SIMULATION, 2009, 卷号: 79, 期号: 10, 页码: 3026-3037
作者:  Wu, Ling-Yun;  Li, Zhenping;  Wang, Rui-Sheng;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载：144/0  |  提交时间：2018/07/30
SNP  Haplotype assembly  Minimum error correction  Self-organizing maps  Neural network  
Minimum Conflict Individual Haplotyping from SNP Fragments and Related Genotype 期刊论文
EVOLUTIONARY BIOINFORMATICS, 2006, 卷号: 2, 页码: 261-270
作者:  Zhang, Xiang-Sun;  Wang, Rui-Sheng;  Wu, Ling-Yun;  Zhang, Wei
收藏  |  浏览/下载：120/0  |  提交时间：2018/07/30
individual haplotyping  minimum conflict individual haplotyping  NP-hard  dynamic programming  feed-forward neural network  reconstruction rate  
Haplotype reconstruction from SNP fragments by minimum error correction 期刊论文
BIOINFORMATICS, 2005, 卷号: 21, 期号: 10, 页码: 2456-2462
作者:  Wang, RS;  Wu, LY;  Li, ZP;  Zhang, XS
收藏  |  浏览/下载：132/0  |  提交时间：2018/07/30