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Robust Bayesian matrix decomposition with mixture of Gaussian noise 期刊论文
NEUROCOMPUTING, 2021, 卷号: 449, 页码: 108-116
作者:  Wang, Haohui;  Zhang, Chihao;  Zhang, Shihua
收藏  |  浏览/下载:140/0  |  提交时间:2021/10/26
Bayesian method  Matrix decomposition  Maximum a posterior  Mixture of Gaussians  
Comparison of Computational Methods for Imputing Single-Cell RNA-Sequencing Data 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 2, 页码: 376-389
作者:  Zhang, Lihua;  Zhang, Shihua
收藏  |  浏览/下载:160/0  |  提交时间:2020/05/24
Gene expression  Sequential analysis  Bioinformatics  RNA  Matrix converters  Computational biology  Bayes methods  Single-cell RNA-sequencing technique  dropout event  imputation  algorithm  bioinformatics  
MSIQ: JOINT MODELING OF MULTIPLE RNA-SEQ SAMPLES FOR ACCURATE ISOFORM QUANTIFICATION 期刊论文
ANNALS OF APPLIED STATISTICS, 2018, 卷号: 12, 期号: 1, 页码: 510-539
作者:  Li, Wei Vivian;  Zhao, Anqi;  Zhang, Shihua;  Li, Jingyi Jessica
收藏  |  浏览/下载:191/0  |  提交时间:2018/07/30
Isoform abundance estimation  joint inference from multiple samples  RNA sequencing  Bayesian hierarchical models  Gibbs sampling  data heterogeneity  
High-dimensional genomic data bias correction and data integration using MANCIE 期刊论文
NATURE COMMUNICATIONS, 2016, 卷号: 7, 页码: 8
作者:  Zang, Chongzhi;  Wang, Tao;  Deng, Ke;  Li, Bo;  Hu, Sheng'en;  Qin, Qian;  Xiao, Tengfei;  Zhang, Shihua;  Meyer, Clifford A.;  He, Housheng Hansen;  Brown, Myles;  Liu, Jun S.;  Xie, Yang;  Liu, X. Shirley
收藏  |  浏览/下载:158/0  |  提交时间:2018/07/30